ggKbase home page

scnpilot_p_inoc_scaffold_135_97

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 106559..107668

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IUZ5_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 353.0
  • Bit_score: 325
  • Evalue 8.30e-86
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 350.0
  • Bit_score: 364
  • Evalue 3.50e-98
Uncharacterized protein {ECO:0000313|EMBL:AKD54852.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 350.0
  • Bit_score: 364
  • Evalue 1.70e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGAAAGCAAATAGCATCATAACCATTATACCGTTGCTGTTAATATGCCTCAGCTTTACGGCATGTAACAAGCAAGAGGAAATGCATCCTTTAAGAAAAAGCCTGCAACAAGCTGTATTTGCGAGTGGACACCTGGAACAGGAAAATGAATACGTTATTGCGAGTACGGCGGATGGGATTATTAAGGAGCTGAATATTCATGAAGGGGATAATGTGACGGCAGACCAGATACTGGTGCGCATAAAAAGCGACGCACAGGATGCGCAATTGCGGGATGCACAGATTGCATACAATGATGCCCTGCAAAATGCAACTCCGGATGCACCACAGTTATTACAGATTCAGTCACAGATCGATATCGCCAGAAAGCAGCTTAATCAGGACAAACTGAATTACGAGCGCTATGCTGCTTTAAGAAAGAAAAATTCAGTGTCACCGCTTGATCTTGAAAAGGCCGAACTACAATACAAAACTTCGCAAGCTAACCTTCAGATATTGGAGAAGAATTATATTCAGATACAGAATGCTCTTCGATTAAATGCTAACAGAGGTTTGCAACAGGTCAAAACACAACAGGCGATGTTAAGCGAGTATGTGGTCAAAGCAGACAAACCGGGTATTGTATTAGATGTTCTTAAAAAGAAAGGGGAATTGGTAGGTAAAGGCGAGGTGATCGCCAAGATTGGCAGCGGTAAACATATCCTGAAGCTCTTTGTTGCAGAAGATGATATTACCAAGATCAGTATCGGGCAACAGGTCATCGTGCAAATGAATAATTACCCGGACACCACGTTCACGGCTTCCATTATCAGAATACTTCCCGAATTCAACCAGACAGAGCAATCCTATATTGCAGAAGCTGTATTTGTGAATCCACCGAAACTGCTGCTCTCGGGAACACAGTTGCAGGCAAATATTAATCAGGCAACTATCAGAAATGTTTTGGTCATTCCATCATCAGCTCTGGTGAGAGGCCGTTTTGTAAAGCTAAAGGACGGAACAGAAAGAGCCATTAAAACCGGACAAAATTTAGGAAGTTGGGTAGAGGTAAAATCAGGGCTAACCGAACAGGATATTATTCTTTTACCTAAGGGAAAAAAGACAAAATAA
PROTEIN sequence
Length: 370
MKANSIITIIPLLLICLSFTACNKQEEMHPLRKSLQQAVFASGHLEQENEYVIASTADGIIKELNIHEGDNVTADQILVRIKSDAQDAQLRDAQIAYNDALQNATPDAPQLLQIQSQIDIARKQLNQDKLNYERYAALRKKNSVSPLDLEKAELQYKTSQANLQILEKNYIQIQNALRLNANRGLQQVKTQQAMLSEYVVKADKPGIVLDVLKKKGELVGKGEVIAKIGSGKHILKLFVAEDDITKISIGQQVIVQMNNYPDTTFTASIIRILPEFNQTEQSYIAEAVFVNPPKLLLSGTQLQANINQATIRNVLVIPSSALVRGRFVKLKDGTERAIKTGQNLGSWVEVKSGLTEQDIILLPKGKKTK*