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scnpilot_p_inoc_scaffold_492_8

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 7514..8089

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C9Y3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 231
  • Evalue 6.50e-58
Helix-turn-helix protein {ECO:0000313|EMBL:EIJ40426.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 231
  • Evalue 9.10e-58
helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 197.0
  • Bit_score: 225
  • Evalue 1.70e-56

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Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGTCCATATTAAAAAATATAAGGGAGCAACAAAATCTTACTCAGGAAGAATTAGCGGATCGATCCGGTATTTCGACAAGAACAATACAAAGAATTGAAGCGGGAACAAAACCGAAAGGATATACCCTAAAAATATTAGCAAAGACATTAGGTGTTAAAGAAGAAGAGTTACTGCACAAAAAAGTACAGGAAGCAATTGCAGGAAATCCGGAAGAGAAGGCAATCCGTATGGAAGAACCGGTTTTAGTAAATTATTCATTAATAAAATTAATCAACCTTTCGTCGATACTCTTTGTCATTCTTCCACCCCTTAATATTCTTCTTCCGGTTGTATTGATGTTTGCAACGAAGCAGAAAAATCAGGTAATCAAACAAATTATTTCGATTCAGATTATCTGGACAATTGCAGCGCCCATTATATTTATGATGGTAATTTTTACAAAGCCTGGAAATAAGGTTACATTGTTTACGATGGTAGCTCTGGTTTTAGTGAATATTTACATAATCCTTAGAAATGCAATGGAGATCGATAGAAATAAAAAGCTGTATTATAGGTTGAATTTCAGTATGATATAA
PROTEIN sequence
Length: 192
MSILKNIREQQNLTQEELADRSGISTRTIQRIEAGTKPKGYTLKILAKTLGVKEEELLHKKVQEAIAGNPEEKAIRMEEPVLVNYSLIKLINLSSILFVILPPLNILLPVVLMFATKQKNQVIKQIISIQIIWTIAAPIIFMMVIFTKPGNKVTLFTMVALVLVNIYIILRNAMEIDRNKKLYYRLNFSMI*