ggKbase home page

scnpilot_p_inoc_scaffold_80_15

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(19913..22294)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z762_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 799.0
  • Bit_score: 1314
  • Evalue 0.0
  • rbh
TonB-dependent receptor, plug {ECO:0000313|EMBL:EGD59568.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 799.0
  • Bit_score: 1313
  • Evalue 0.0
TonB-dependent receptor, plug similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 840.0
  • Bit_score: 942
  • Evalue 6.70e-272

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2382
GTGAAACATTCCAAGGCCCTTCTGGCCCTGCCGTTGAGCGCGCTTGTGCTGATGAATGCGGGCGTTGCCCATGCAGCCGACGCCGCCCCGGCAGAAGGCAACGGCACCGGACTGACCGACATTGTCGTGACCGCCACCAAGCGCGAAACCAACCTGCAGAAGACCCCGGTGGCCATCTCGGTGGTCAGCGAGCAGGTCATCAAGGACCGCCATGTTCAAAGCCTGATCGACCTGGCCGATGGCGGCGTGCCCTCGCTGCGCGTGGCCACCTTCGAAGCGCGCCAGTCGGCGCTGACGGTCGGCATCCGCGGCATCGTCCCCTTCGACCAGAACCAGACCGCCCGCGACAGCGGCGTCGGCGTCTATATCGACGGCGTGTATCTCGCCCGCTCGCAGGGCCTGAACGCTGCGCTGTTCGACGTTTCGCGCATCGAAGTGCTGAAAGGTCCGCAGGGCACTCTGTTTGGCCGCAACACCGAAGGCGGCGCCGTCAGCATCGTGACGCGCGACCCCAGCGGCCAGTTCGGCGGCCGCTTCTCGGCAGGCGTGGGCAATTACGGCAGCCACACCGCCGAGGGCCACTTGGACCTGCCCGAATTCAACAATATCGCGGTCAAGATCGACGCGGTGGAACAGCATCAGGACGCCACCGTCAAGAACCCGCTGGCAGGGCAAGCCGGGTGGAACCAGTATGAGCGCGTGGGCGGCCGCATCAGCGCCAAGTGGACCCCAATTCAAGGCTTCTCGGCGCTGGTGTCCTATGACAAGGGCCGCGACGAAAACACGCCCAATTTCAGCCAGCTCATCAACTACAACCCCAATGGCCTGCCGGTCGGAACCTACAACGGCTCCAGCCTGACACTGAACGGCGCCAACTGCACCGCTGGCAAGACCTGCATCGCCCCGCTCTCGCCGCTGGTCACCCCCACGGGCGGCAACCGCCTGTCGACGGCCCCGATCGGCGTGCCCCAGCAGCCCAGCGTCGACCGCACCGAAGGCACCTCGCTGCACCTGAACTATAAGGTGATGCCGGGCATGGAGCTGCGCTCGATCACGGCATGGCGCCGTGTTTCGACCGAGCAGTGGGACAATTCGGGCGGCGCGGCGCGCACCATCTTTGCCCCCAACACCGCTTTCAGCCGCTACAGCCTGTCTTACCTGAACCAGCGTCAGTTCAGCCAGGAACTGCAACTGGTCGGCAGCATCCCGCAGGTCGACTATGTGCTGGGCGGCTATTACTTCAATGAACGCGCCCAGGAACAGGCATCGACCCCCAGCTCGAACACCTGGAATGCGGACGGCACCGGCTATACGATCAACAGCGAAACGGTCTCGGGCGCTGTCACCTCGAAAAATCAGGGCTGGGCCATCGGCCAGCAGTTCCTGCAGCGCGCCAGCGAAGCCTATGCCCGCAGCTATGCCGCGTTTGGCCAGATGACCTATACGCCCGAATGGCTGGACAACAAATTCCACCTGACGCTGGGCGGCCGCTACACCAATGAAAAGCGTCACGGCACGCTTTACTTGGTGCAGGGCATTTCGTCGAACTTCCTGTTCAACGAAAGCGTCAGCCGCTTCGACCCGCTGGCGGTTGCCGCCTATGAGTTGACGCGCAACGTCAACCTCTATGCCAAATATTCGACCGGCTATCGTGCGGGCGGCGCCAATGACCGTTCGCAGACCTTCAACTCGTTTGGCCCCGAAGTCGTGCGCTCGTATGAAATCGGCACCAAGATGGACCTGATGGACCATCACGTTCGCCTCAACCTGGCGGGTTACATGATGGACCGCACCGGCACGCAGACCGACTTCGACAATGTCGACACCAACCCCAACAGCCCGACCTTCAACCTGCACACCGAGGAAACCCGCAACGCGCCGGGCACGTCCAAGATCCGCGGGATCGAGGCCGACCTGACGGTCAAGCCGGCCGAAGGCGTCACGCTGGGCGCGTCCTACGCCTACACCTACACCTTTGTTCCGCCCACGGCCAATCCGTTCCTGAACAATGCCCTGTATCAGGTCTATACGGTCTATACGCCGCGCAATGCCGCCTCGGCCTATGCCGATTACGTCATGCCGGTGAACGCCAATGGCAGCGAGGTGCGCGTGCATCTGGACGCCAACTATGCCCAGTCGCAGTACAGCTTCCAGAACGAGCCGGTGAAGACCGACGCCAGCTTCGTCGTCAACGGCCGCATCGCTCTGGCCTCGGTGCCGATGAGCGGCGCGACCAAGGCGACCTTCTCGGTGTGGAGCCGCAACTTGTTCAACACCACCTACATCTATCGCCGCTCGGGCGCGAATGATGCGGTGCTGGGCGATTACGGCAACTTCAACCCGCCCCGCACCTTCGGCGGCGAGGTGCAGATCACCTTCTAA
PROTEIN sequence
Length: 794
VKHSKALLALPLSALVLMNAGVAHAADAAPAEGNGTGLTDIVVTATKRETNLQKTPVAISVVSEQVIKDRHVQSLIDLADGGVPSLRVATFEARQSALTVGIRGIVPFDQNQTARDSGVGVYIDGVYLARSQGLNAALFDVSRIEVLKGPQGTLFGRNTEGGAVSIVTRDPSGQFGGRFSAGVGNYGSHTAEGHLDLPEFNNIAVKIDAVEQHQDATVKNPLAGQAGWNQYERVGGRISAKWTPIQGFSALVSYDKGRDENTPNFSQLINYNPNGLPVGTYNGSSLTLNGANCTAGKTCIAPLSPLVTPTGGNRLSTAPIGVPQQPSVDRTEGTSLHLNYKVMPGMELRSITAWRRVSTEQWDNSGGAARTIFAPNTAFSRYSLSYLNQRQFSQELQLVGSIPQVDYVLGGYYFNERAQEQASTPSSNTWNADGTGYTINSETVSGAVTSKNQGWAIGQQFLQRASEAYARSYAAFGQMTYTPEWLDNKFHLTLGGRYTNEKRHGTLYLVQGISSNFLFNESVSRFDPLAVAAYELTRNVNLYAKYSTGYRAGGANDRSQTFNSFGPEVVRSYEIGTKMDLMDHHVRLNLAGYMMDRTGTQTDFDNVDTNPNSPTFNLHTEETRNAPGTSKIRGIEADLTVKPAEGVTLGASYAYTYTFVPPTANPFLNNALYQVYTVYTPRNAASAYADYVMPVNANGSEVRVHLDANYAQSQYSFQNEPVKTDASFVVNGRIALASVPMSGATKATFSVWSRNLFNTTYIYRRSGANDAVLGDYGNFNPPRTFGGEVQITF*