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scnpilot_p_inoc_scaffold_80_41

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 55844..56689

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003764923 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 189.0
  • Bit_score: 163
  • Evalue 3.20e-37
Putative Integral outer membrane protein TolC, efflux pump component {ECO:0000313|EMBL:EGD58115.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 189.0
  • Bit_score: 163
  • Evalue 4.50e-37
RND transporter similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 252.0
  • Bit_score: 113
  • Evalue 1.40e-22

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGTTTCTTCACGAACGGACCCGTTTCCAAGGGCTGGTTCCGGCGCTCCTCCTCGCCTGCGCGGCCTGTACGCCGCAGGCGGGGCTTCATACGCAGGCCCCGGCCCAGGCTGAGCCATCGGCGGCGGGGGATTGGTGGCATCAATCGGGCGATGCGCTGCTGGATGAAATGGTGGCCCAGGCGTTGAGCGCCCTGCCGCCGGTTTGTGACGCGCCGCAGCGGGGCATCGGCGGCGGCATCCGGGCCGTGCTGCATCACCAAAGCGCCGAAAAACGCCGCGCCCAGGAGCATGAGCGTATGGTGCAGCGCCTGCAAAAGGCCGAGGCGGTGGCCGGGGCCTATCTGCGGCTGCGTGCTTGGGCCGACCGTCTGGCCGCGCGCCATGCGATGCTGGCGCCATGGGCCGACAATGCCGAAATCGCTCGTTTCCGCCGCGAGGCCGGTCTGGTGCCCGCGCTGGACGAGGATATGGCAGGCGTGATGGTGGGCCTGAATGCCAGCGACGAGGAGGCCGCCCGCGCCGGGCTGGAGCGCGCGCTGGCTGATCTGGCGCGTCTGACCGGACAGGACGGCGCGGCTCTGCGCGCAAGGCTGGACAAGACCTCGGCCATGCCGATCGGCAATCCGGCACCTCCTAATCTTTTGCTGGCGCAGGCCGAGGCGGCCTTGACCAATGCCCGCATCGCCTATCGCGGCGGGGCGGCCAGTTTCGCCACGCTCTATGTGGCCGAGGCCAATGCCTTGGCCGCGCGTGAGGCGCAGATCATGGCCAATCACACCGCCGCCCTTGCCACCATCCGCCAATGGAGCGAAAAGGCCCTGGCCGAGGAGGCGCATTGTGGCTGA
PROTEIN sequence
Length: 282
MFLHERTRFQGLVPALLLACAACTPQAGLHTQAPAQAEPSAAGDWWHQSGDALLDEMVAQALSALPPVCDAPQRGIGGGIRAVLHHQSAEKRRAQEHERMVQRLQKAEAVAGAYLRLRAWADRLAARHAMLAPWADNAEIARFRREAGLVPALDEDMAGVMVGLNASDEEAARAGLERALADLARLTGQDGAALRARLDKTSAMPIGNPAPPNLLLAQAEAALTNARIAYRGGAASFATLYVAEANALAAREAQIMANHTAALATIRQWSEKALAEEAHCG*