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scnpilot_p_inoc_scaffold_80_68

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(87311..88609)

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Novosphingobium sp. AP12 RepID=J3A930_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 415.0
  • Bit_score: 500
  • Evalue 2.20e-138
  • rbh
Sensor histidine kinase prrB {ECO:0000313|EMBL:GAO55521.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 419.0
  • Bit_score: 542
  • Evalue 4.20e-151
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 406.0
  • Bit_score: 483
  • Evalue 4.60e-134

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGGCAACCCAAATCGCGCCCGATTATGACATAGCCCCCGCCTCCTATGGCAATATGGGGCTGCTGGTTCAGCTGCGCTGGATCGCGGTGCTGGGGCAATTGGTGACGATCTGGGTGGCGTGGCGCGTGCTGGGTGTGCGCCTGCCCATGGCCGAACTGGTGGCGGTGCCGGCGCTTCTGGCGCTGATGAACATCGGCACATGGGCCTATGGGCGTCAGCGCGCGGGCTATTCCTATCTGGAACTGCTGGGCGCGCTGATGCTCGATGTCGAGGCGCTGAGTTGGCAGCTCTATTTCACCGGCGGCGCGACCAACCCCTTCATCTTCCTGTTTCTGGTCCAGATCATGCTGGGCGCGATCCTGCTGCCCGCGCGGTGGAGCTGGATCGTCGCGCTGGTCGCGTGCTGCGATGTAGCGTTCCTGACCTTCGATTATCGCCCGCTCGATCTGCCGCCTGCCTATGTGGGCGAACATTTCCGGCTCTATCTGCTGGGCAGTCTGGCCTGTTTTGTGCTGATCGCGGCGCTCTTGGTCTATTTCGTCGTCCGCATGGACCGCAACCAGCGCGCCAGCAGCGCCGCCCTTGCCGCCCTGCGCCAACAGGCAGCGGAGGAGAATCATATCATCCGATTGGGCCTGCTGGCCAGCGGCGCGGCGCATGAACTGGGTACGCCAATGGCCTCGATGTCGGTGATCCTTGGCGACTGGGCGCGGGAAAAGACCATTGCGGGCGACCCAGACCTAGCCGCAGATGTAGCCGATATGCAGGCGGAACTCAAACGCTGCAAAACCATCCTGTCGGGCATTTTGGTGGCCGCGGGCGAGGTGCGCGGCGAGAACCCCAGCGTCACTACCGCGCGCGGGTTTCTACGCGAAATCGTCGAGGACTGGCGCGCGCGCAGCCCCGCCCCCATCACGCTGGACGACCGGCTGGGCGAAGATGTGCCTATCATCGCCGACCCGGCGCTGCGGCAAGTGATCGGCAATGTGGTGGACAATGCGCTGGAGGTTTCCCCCGAAGGCATCGCCATCGCCACCGCGCGCGAGGGCGACATCTGGCAGATCGCCGTGCGCGATTTCGGCCCCGGTTTCGCCCCCGACATGATTGACCAGGTCGGCCGCCCCTATCGCTCGACCAAGGGGCGCGATGGCGGCGGGCTCGGCCTGTTCCTCGTGGTCAACGTGCTGCGTCAGCTTGGCGGGCGGATCGAAGTGAGTAATACCGAAGAGGGCGGCGCGCTGGTCGTCCTTTCGATCCCATTGTCGGCGCTGGCTTTTACGGGCAAAGGAACATCATGA
PROTEIN sequence
Length: 433
MATQIAPDYDIAPASYGNMGLLVQLRWIAVLGQLVTIWVAWRVLGVRLPMAELVAVPALLALMNIGTWAYGRQRAGYSYLELLGALMLDVEALSWQLYFTGGATNPFIFLFLVQIMLGAILLPARWSWIVALVACCDVAFLTFDYRPLDLPPAYVGEHFRLYLLGSLACFVLIAALLVYFVVRMDRNQRASSAALAALRQQAAEENHIIRLGLLASGAAHELGTPMASMSVILGDWAREKTIAGDPDLAADVADMQAELKRCKTILSGILVAAGEVRGENPSVTTARGFLREIVEDWRARSPAPITLDDRLGEDVPIIADPALRQVIGNVVDNALEVSPEGIAIATAREGDIWQIAVRDFGPGFAPDMIDQVGRPYRSTKGRDGGGLGLFLVVNVLRQLGGRIEVSNTEEGGALVVLSIPLSALAFTGKGTS*