ggKbase home page

scnpilot_p_inoc_scaffold_80_308

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 335005..335943

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QFB0_SHELP similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 297.0
  • Bit_score: 191
  • Evalue 9.30e-46
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 294.0
  • Bit_score: 251
  • Evalue 1.80e-63
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 297.0
  • Bit_score: 191
  • Evalue 2.60e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGCGCCCAGGCCAGTTGTCCGATATTCAGTATGACGCGCTTGAACTGTTCGAACGGGTGGCCCGTTCGGGCAGTATCGCGGCCGCCGCGCGCGGATTGGGCATTTCGGCCTCCACCGCCACGCGCAAATTGCTGACGCTTGAAAAGGCGCTCAATGCGCGCCTGTTCAAACGCACCACGCGCAGCCTGAGCCTGACCGAGGCGGGGGCGCTGGCGCTGGACTGGGCGCAGACGTCTTTGATTGCGCTGGAGGAAACGGCCGACGATCTGGCCGCGATCACGGGTGCGCCTTCGGGGCGGATACGCCTTGCCGCGCCCCATTTCGGCATGAACACCTATTTGCCGCCGGTGCTTTCCAGCTTTTCGCGCGCCTATCCGCGCATCAATCTGGAAATCGTGACCACCGACGATCTGGTCAATCCGGCCACCGACGGGTTCGACATCGTCATCCGCTACGGCACCTTGCCCGACAGCCGCAATGTGGCCGTGCGCCTGACCGAATTTGACCGTATCGTCTGCGCATCACCGGAATATCTTGCCGAATATGGCACGCCCAAAAAACTGGAGGATCTGGCTGTCCATCAATGCATCGTCCATCAGGGGCATGATGAAACGCGCTGGTCCTTTGAGCGCGAAGGGCAGTTGCTCCACCAGCCCATTCTGGCGCGGATACGCACCGACAATGCCTTTTCGATTGAAATGTTCGCCGTCGAAGGGGCGGGCATCGCGCGTCTGCCCACGATCACCGTGCGGCGCAATCTTGCCTGCGGGCGCCTTGTCCGGTTGCTGGACGATTATCAATGCGTCGAACCATCGGGCGACAAATCCAGCATCTGGGTGCTGCACAGCGGTCAGGACATGCCTTATCGGGTGCGCATCTTCATGGACCATTTGAAGGCGCAGATTCCGATGGCGCGTCAGGCCATCTATAATTCATGA
PROTEIN sequence
Length: 313
MRPGQLSDIQYDALELFERVARSGSIAAAARGLGISASTATRKLLTLEKALNARLFKRTTRSLSLTEAGALALDWAQTSLIALEETADDLAAITGAPSGRIRLAAPHFGMNTYLPPVLSSFSRAYPRINLEIVTTDDLVNPATDGFDIVIRYGTLPDSRNVAVRLTEFDRIVCASPEYLAEYGTPKKLEDLAVHQCIVHQGHDETRWSFEREGQLLHQPILARIRTDNAFSIEMFAVEGAGIARLPTITVRRNLACGRLVRLLDDYQCVEPSGDKSSIWVLHSGQDMPYRVRIFMDHLKAQIPMARQAIYNS*