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scnpilot_p_inoc_scaffold_80_468

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(472842..473603)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, OmpR family, response regulator n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIC3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 255.0
  • Bit_score: 372
  • Evalue 3.10e-100
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:KHK91694.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 249.0
  • Bit_score: 378
  • Evalue 1.00e-101
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 255.0
  • Bit_score: 372
  • Evalue 8.80e-101

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGTCGATGAGCAACAACGAGAAAGCCGCATCTTCTGCCACGCCGCGCCACACGATCGCGCTGGTGGATGATGACCGCAATATTTTAACCAGCGTTTCCATAGGCTTGCAGGCCGAAGGCTTTACCACGCGCGTCTATGCCGATGGCGCCAGCGCGTTGAAAGCCTGCCTTGAAAATCCGCCCGATCTGGCGATTTTCGATATCAAGATGCCGCGTATGGACGGGCTGGAACTGTTGCAGCGCCTGCGCGAAAAATCCGCGCTGCCGGTGATTTTCCTGACCAGCAAGGATGAGGAGCCCGACGAGGCGCTGGGCCTTGCCATGGGCGCGGATGATTACATCACCAAGCCCTTTAGCCAGCGGCTGTTGGTGGCGCGAATCCGCGCGATTCTGCGCCGGGTCGAGGTGGCCCGCGCCGATGCCGCCGAACCTGCCCAGGATGACACGCCCACCCCCGATCTGGTGCATCGCGGCCGGTTGAGCATGGACCCGGCCCGCCATGAGGTGCGATGGGATGACCGGCCCGTCTCGCTGACCGTCACCGAATTCCTGATCCTAGAAACGCTGGCCCAGCGCCCCGGCGTCATCAAGAGCCGCAACCAGTTGATGGACTGCGCCTATAATGATGACACCTATGTCGATGATCGCACCATCGATTCGCACATCAAGCGCCTGCGCCGCAAATTCCGTCAGGTGGACCCGACATTTTCGGCCATCGAAACGCTGTATGGCGCAGGCTATTCCTTCAGCGAGGGCGGATGA
PROTEIN sequence
Length: 254
MSMSNNEKAASSATPRHTIALVDDDRNILTSVSIGLQAEGFTTRVYADGASALKACLENPPDLAIFDIKMPRMDGLELLQRLREKSALPVIFLTSKDEEPDEALGLAMGADDYITKPFSQRLLVARIRAILRRVEVARADAAEPAQDDTPTPDLVHRGRLSMDPARHEVRWDDRPVSLTVTEFLILETLAQRPGVIKSRNQLMDCAYNDDTYVDDRTIDSHIKRLRRKFRQVDPTFSAIETLYGAGYSFSEGG*