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scnpilot_p_inoc_scaffold_238_24

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 27274..27996

Top 3 Functional Annotations

Value Algorithm Source
Aminomethyl transferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9U4_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 246.0
  • Bit_score: 298
  • Evalue 7.10e-78
glycine cleavage T protein (aminomethyl transferase); K06980 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 236.0
  • Bit_score: 309
  • Evalue 3.30e-81
glycine cleavage system protein T similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 246.0
  • Bit_score: 298
  • Evalue 2.00e-78

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Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACGAAGCTTGCCTCCCGCGCCGTGATCCGCCTCTCGCCAACCGACCCGCAGGAGGACGTCCGCAAATTCCTGCAAGGGTTGGTGACGCAGGATGTCGTGCTGGGCGCGCTGCCGACCTATGCCGCGCTGTTGACGCCGCAGGGCAAGGTGATCGCCGATTTCATCGTATGGGCCGATGGGGCGGACCTGCTGCTGGATGTGGCGGCGGATCAGGCCGATGGGGTGGTCAAACGCCTGTCGATGTATCGCCTGCGCCGCGCCATCGCCATCGCGCGGGATGATGCTTTGGCCGTGCATTGGAGCGCCACGCCCCAAGATGGCGCCACCCCCGACCCGCGCCTTGCGGAACTGGGCTATCGCTGGCTGGCGCCGGATGATGATGCGGCGGTTGATGAGGCCTATCTGGCCCATCGCCTGTCTTTGGGCGTGGTCGAAGGGGCCGAGATTGCCGACCTGCTCTGGCTGGAATGCAACGCGGTGGAGCTAAACGGCGTATCCTTCACCAAGGGCTGCTATGTCGGGCAGGAGAACACCGCGCGCATGAACTGGCGGCAAAAGGTCAATCGTCGGGTGGTCGTGGTGCCCGCCGCGCAATCACGCCCGGATCGACAGAGGGTGGATTATCCCGCGCTGGGCCTGTCGGTCGAACATTGGCGGGTGGATGACATTACCAACCCGCCCGCGTGGTTCGCGCAGGAAGACCTTAGCCCAGAGGCGTAA
PROTEIN sequence
Length: 241
MTKLASRAVIRLSPTDPQEDVRKFLQGLVTQDVVLGALPTYAALLTPQGKVIADFIVWADGADLLLDVAADQADGVVKRLSMYRLRRAIAIARDDALAVHWSATPQDGATPDPRLAELGYRWLAPDDDAAVDEAYLAHRLSLGVVEGAEIADLLWLECNAVELNGVSFTKGCYVGQENTARMNWRQKVNRRVVVVPAAQSRPDRQRVDYPALGLSVEHWRVDDITNPPAWFAQEDLSPEA*