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scnpilot_p_inoc_scaffold_238_25

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(27980..28588)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9U5_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 220
  • Evalue 1.20e-54
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 220
  • Evalue 3.40e-55
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD25378.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 220
  • Evalue 1.70e-54

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGGCCCGAAGAAGCGTCTCTCCCCCGAAGCCAGCCGCAATGCCGCGATGGAGGCAGCGCGCGATCTGCTTGTCGAGCAGGGGCCGCAGGGGGTGACGCTCAAAGCCGTGGCGGCGCGGGTGGGGCGCACCCATGCCAATCTGCTGCACCATTTCGGTTCGGCGGCCGAGCTGCAAAAGGCGCTGGCCGAGCATATGGCGGTGTCGATCTGCGCCTCGGTCGCGCGCGCCGTGCTGGCCCAGCGCGATGGCAGCGGCAGCGCGCGCGATGTGGTCGATCTGGCCTTTGACGCCTTTGAAAAGCAAGGCGGCGGGCAATTGGTCAGCTGGATGCGGCTGATCGGCAATGTCGATGCGCTCGACACCATCGTCCGCGCGATCCACGCCATCGTGGACGAGGTGCATGATGCGGGCGAGGTCTGCATGCGTCATGTGACGCAGACGCTGGTGCTGCTGGCGCTGGGCGATTCGCTGATCGGCGCGCCCTTGGCCGATTCGCTGGAAATCTCGCGCGATTCGAGCCGCGAGATGGCCGCCCGCCTGATCGAAACCGAGGCGGTGCGGCTGGGGCTGGTCCCGGCGGAGCGGGCGCTTACGCCTCTGGGCTAA
PROTEIN sequence
Length: 203
MGPKKRLSPEASRNAAMEAARDLLVEQGPQGVTLKAVAARVGRTHANLLHHFGSAAELQKALAEHMAVSICASVARAVLAQRDGSGSARDVVDLAFDAFEKQGGGQLVSWMRLIGNVDALDTIVRAIHAIVDEVHDAGEVCMRHVTQTLVLLALGDSLIGAPLADSLEISRDSSREMAARLIETEAVRLGLVPAERALTPLG*