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scnpilot_p_inoc_scaffold_238_27

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(29659..29928)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI51_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 1.60e-38
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 2.20e-38
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 161
  • Evalue 1.10e-37

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCACATAAGAAAGCAGGCGGTTCGTCGCGTAACGGTCGCGACTCGCAGTCCAAGCGCCTTGGCGTGAAGAAGTTCGGCAGCCAGCTGGTGATCGGTGGCAACATCATCATCCGTCAGCGCGGCACGAAGGTCTATCCGGGCGTGAACGTGGGCATCGGCAAGGACCACACCCTGTTCGCTCTGACCGAAGGCCGCGTGCGCTTTCATGAAGGCAAGCTGGGCCGCAAATACGTGTCGGTTGACGCGTTGGCCGAAGCCGCCGAGTAA
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSQSKRLGVKKFGSQLVIGGNIIIRQRGTKVYPGVNVGIGKDHTLFALTEGRVRFHEGKLGRKYVSVDALAEAAE*