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scnpilot_p_inoc_scaffold_238_53

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(50076..51338)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 418.0
  • Bit_score: 653
  • Evalue 4.30e-185
Diaminopimelate decarboxylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4W2_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 418.0
  • Bit_score: 653
  • Evalue 1.50e-184
  • rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 418.0
  • Bit_score: 653
  • Evalue 2.10e-184

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGATCATTTTCATTACGTTGACGGCGTTCTTCATGCCGAAGACACCGCCATTCCCGCCATTGCCCGCGCCGTGGGCACGCCGGTTTACATCTATTCGGCCGCCACGCTGACCCGCCACGCGCGCGTGTTCCGCGAGGCTCTGTCGATCCTGCCCTCGACGCATATCGCCTTTGCGGTCAAGTCGAACCCCAATCTGGCGGTCTTGAAGCTGCTGGCGCGCGAAGGTTACGGCGCGGACGTGGTCTCTGCGGGCGAGATGGACCGCGCGCTGGCCGCCGGTATCCCGGCGCAGGGCGTGGTCTTTTCCGGCGTCGGCAAGACGGCGGACGAGCTGACCCGCGCGCTTAAGGCGGGCATCGGCCAGTTCAACATCGAGAGCGAAGAGGAAGGCGTCGAGCTGGCCGCGATTGCCGCTTCGCTCGGACTGGTGGCCCATGCCGCGCTCCGCGTGAACCCGGATGTGGACGCGGGCACCCATGCCAAGATTTCCACCGGCATGGCGGAAAACAAGTTCGGCGTGGCCTATGACCGCGCCGCCGGGATCTATGCGCGCCTGTCCGCGCTGCCGGGTATCGAGATGCGCGGGCTTGCCGTCCATATCGGCAGCCAGTTGTCCAGGCTCGACCCGCTGGAGGCCGCGTTTAGCAAGATGGGCGAGCTGATGCGCTCGATCCGCGGGCAGGGCCTGAGCATCACCCATATGGATCTGGGCGGCGGCATCGGCGTGCCTTACAAGGCGGATGAGGTGTTTCCCTCTCCGGCCGAATATGCCGCCATGGTGGCGCGCGTCACGGCCGATTGGGGCGTCACACTGATGTTCGAACCGGGCCGCGTGATCGCGGGCAATTCGGGCGTGCTGGTCACCGAGGTTGTGCGCGTCAAGGAAGGCGTGACCACGCCCTTCGTCATCGTCGATGCGGCCATGAACGACCTTGCCCGCCCGGCGCTCTATGGCTCGTGGCACGATTTTCTGGCCGTCGAGCCCAATGGCGAAAAGTTCACCGCCAATATCGTCGGCCCGATCTGCGAATCCTCCGACACCTTTGCCATGGGCCGCGAGATCGACGTGGTGAAGGCGGGCGATCTTGCCGTGTTCCGCACCGCCGGGGCCTATGGCGCCACCATGGCCAACACCTATAACAGCCGCGCGCTGGTGCCCGAGGTGATGGTCAATGGCGATCAGTGGGCGGTTGTCGCCAATCGGATTGATCCTGCGGCCATTTTGGCGGCGGAGCAGGTGCCGAATTGGTTGATGGATTAA
PROTEIN sequence
Length: 421
MDHFHYVDGVLHAEDTAIPAIARAVGTPVYIYSAATLTRHARVFREALSILPSTHIAFAVKSNPNLAVLKLLAREGYGADVVSAGEMDRALAAGIPAQGVVFSGVGKTADELTRALKAGIGQFNIESEEEGVELAAIAASLGLVAHAALRVNPDVDAGTHAKISTGMAENKFGVAYDRAAGIYARLSALPGIEMRGLAVHIGSQLSRLDPLEAAFSKMGELMRSIRGQGLSITHMDLGGGIGVPYKADEVFPSPAEYAAMVARVTADWGVTLMFEPGRVIAGNSGVLVTEVVRVKEGVTTPFVIVDAAMNDLARPALYGSWHDFLAVEPNGEKFTANIVGPICESSDTFAMGREIDVVKAGDLAVFRTAGAYGATMANTYNSRALVPEVMVNGDQWAVVANRIDPAAILAAEQVPNWLMD*