ggKbase home page

scnpilot_p_inoc_scaffold_238_68

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 69213..71495

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEE8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 733.0
  • Bit_score: 723
  • Evalue 1.70e-205
  • rbh
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 733.0
  • Bit_score: 723
  • Evalue 4.70e-206
TonB-dependent receptor {ECO:0000313|EMBL:CCA90673.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 733.0
  • Bit_score: 723
  • Evalue 2.30e-205

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2283
ATGAAGACGCATCTGCTGGGCGGCGCTGCCGTTGCCCTTGCCCTGTCCGTCGCGACCCCCGCCTTTGCCCAGAGCGCCGACGCTCCGGCACCCGCCGCCAATTCGGGCGACATCGTGGTGACCGCGACCCGCCAGAGCACCCTGCTGTCCAAGACCCCGGTCGCCATGACCGCCGTGACCGGCGACAGCCTGCGCAGCGCCGGCATCACCGATCCGCGCTCGCTGGCCCAGGTTGCCCCCAACCTTGCCATCACCGAAAGCGGCGACGGCGTACGCATCGCCATCCGCGGCGTGACCAGCACCGACGGCACCGAAAAGGGCGACCCCTCGGCCGCCTTCCTGCTCGACGGCATCTATATCGCCCGCCCGCAGGACCAGAAGGGCGCCTTCTTCGACGTGGCGCAGGTTGAAGTGCTGCGCGGCCCCCAGGGCACGCTCTATGGCCGCAACACCACCGCAGGCGTCGTCAACGTTCAGTCGGCCCGCCCCAAGGCCAAGTGGGAAGGTTCGTTCGACGCCAAGGTCGGCAATCTGAACAGCCAGAACTACACCGGCATGATCAACGCGCCGATCGGCAATTCGCTGGGCATCCGTCTGGCCGCCAACTTTGACCGTCAGGACGGCAACGTTCTGGAAACGGCCACCAACCCGGCCTATCCGCTCAACCCCTATCGCAAGATCTTCTCGACCCGCCTGTCGTTCGGCGGCGACATCGGCCGCCTGAAGTTCGTCGTGCGCGGCGATTATTCGAGCCAGCGCGGTTCGATGACCAACGTTGTGCCGCTCAGCAACTTCTACACCAACACCGGCACCGTGGGCGTGAACCCGACCTTCATCTCGGGCAAGAGCGCGAACGCCTATCGCGGTCTGGGCTATGGTCAGCAGTATTCCAGCTATAAGTGGAACACGACCAAGGGTGTGATGGGTGAGTTCACCTACAACCTGACCGACACGATCGATCTGACCTATCTGGGTTCGTATCGCGAATCTAAGCAGGACTTCACACAGGACCTGCTGTTCCTTGGCGTGCTGGAAAACCCGGCGACTTTCTGGGGCCGCTATCACCAGAATTCGCAGGAACTGCGTCTGGCCTTCGGCAAGGGCAACAAGCTGCATGGTCAGGCAGGCGGCTATTTCTTCGAGGAAAAGTCGTATCTGAACTATACGCTGGGCAACCCGCTCTCCTCGATGGTCTACAGCGGCGCTTCGGGTTACGCCTTCCCGCAGGGCCCGACCGTGTCGCGCTCGAAGGCTGGCTTTGCCCAAATCACCTATGACGTTCAGCCCGGCCTGCACATCACGGGCGGCGTGCGCTACACCAACGACTTCAAGTCGCGCAACGGCGCCACGGTGCTGTATTTCCCCAATCAGGCCTCGGTCCCCTCGGCATTCGGTTCGCAGTGCGTGGGCACCACCTGCACGCTCAACCTGAACATCGCCTCGGCCACGTTCGAAAAGGTGACGTGGAAGGTCGGCGTCGACTATGACGTGCCGGGCCTGGGCCTTGCCTATTTCAACGTCTCGACCGGCTATAAGGCGGGCGGCTTCAACGACGGCTGCGTCAGCGGTTCGGGTCTGGGCTGCGCGCTCAGCGCCGGTCAGCTCTACTATCACCCCGAACAGCTCACCGCCTATGAAGGCGGCGTGAAGTTCAAGTTCGCTGACGGCAAGGTGCGTTTCAACGCTTCGGCCTTCCACTATGATTACAGCAACCTCCAGCTTTCGCAGGCTGCCACGCTGACCGACGCCACCACCGGCGCCAAGGTGTTGCAGACGCTGATCCAGAACGCGGGCACGGCCAAGATCGACGGCGTGGAAACCGAAACCATCCTGAAGCCGACTTCGGATGACACGTTCAACATTGCGCTGAACTACACCAACGCTCGCTTCTCGAGCTTCTCGCCCACCAACTCCTCGGGCCAGACGGTGAATTTCAGCGGCAAGCAACTGGATCACGCGCCCAAGTGGACCGCGACCTTTGGCTATACCCGCAACTTTGACCTGGCCAATGGCGGCCATGTTGAAGCCGGAGCACGCACCCAGCTCTCGTCCGAATATTACATCTCTGACCTGAACATGCTCTATCAGTTCCGTATGCCCAGCTATACCAAGACCGACGTGACGCTGACCTACAAGGCGCCCCACGACCGCTGGTACATTCAGGGCTATGCCAAGAATCTGGAAAACGTGATCACCGTGGCCAACGCCGTGGCCGGCAATACGCCCGCCGTGACCATGGAAGAACCGCGCACCTATGGCGTCCGCGCCGGTGTGAAGTTCTAA
PROTEIN sequence
Length: 761
MKTHLLGGAAVALALSVATPAFAQSADAPAPAANSGDIVVTATRQSTLLSKTPVAMTAVTGDSLRSAGITDPRSLAQVAPNLAITESGDGVRIAIRGVTSTDGTEKGDPSAAFLLDGIYIARPQDQKGAFFDVAQVEVLRGPQGTLYGRNTTAGVVNVQSARPKAKWEGSFDAKVGNLNSQNYTGMINAPIGNSLGIRLAANFDRQDGNVLETATNPAYPLNPYRKIFSTRLSFGGDIGRLKFVVRGDYSSQRGSMTNVVPLSNFYTNTGTVGVNPTFISGKSANAYRGLGYGQQYSSYKWNTTKGVMGEFTYNLTDTIDLTYLGSYRESKQDFTQDLLFLGVLENPATFWGRYHQNSQELRLAFGKGNKLHGQAGGYFFEEKSYLNYTLGNPLSSMVYSGASGYAFPQGPTVSRSKAGFAQITYDVQPGLHITGGVRYTNDFKSRNGATVLYFPNQASVPSAFGSQCVGTTCTLNLNIASATFEKVTWKVGVDYDVPGLGLAYFNVSTGYKAGGFNDGCVSGSGLGCALSAGQLYYHPEQLTAYEGGVKFKFADGKVRFNASAFHYDYSNLQLSQAATLTDATTGAKVLQTLIQNAGTAKIDGVETETILKPTSDDTFNIALNYTNARFSSFSPTNSSGQTVNFSGKQLDHAPKWTATFGYTRNFDLANGGHVEAGARTQLSSEYYISDLNMLYQFRMPSYTKTDVTLTYKAPHDRWYIQGYAKNLENVITVANAVAGNTPAVTMEEPRTYGVRAGVKF*