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scnpilot_p_inoc_scaffold_530_13

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 10934..11647

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB96C similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 233.0
  • Bit_score: 364
  • Evalue 6.10e-98
  • rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KHK89904.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 236.0
  • Bit_score: 316
  • Evalue 4.50e-83
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 235.0
  • Bit_score: 315
  • Evalue 1.60e-83

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCGGGGCGGCTCGACGGGCGCTGCGGCCTTGTCACGGGCGCGGGGTCGGGCATTGGGGCGGCCACCGCCCGCCGCCTGCGACAGGACGGCGCGCAGGTGCTGACGGCGGATCTGCGGGGCGAGGTTGACCTGCTGCTCGACGTGACCGCGCGCGATGCGGGCAAGGCCCTGACCGAGGCGGCGATGGCCCGCTTTGGCCGCCTCGATTTCGTCGTCCCCTGCGCCGGTGTCAGCGCTTTTTGCCCGCTTGCCGGGCACAGCGACGACTATTTCGAGCAGGTCATGGCGGTCAATGTCACCGCCGTCTTCCGGCTGATCCGCGATGCCGCGCCCCATTTGTGCGCCAGCCCGGCGGGGCGGATCGTCACCATCGGCTCGGTCACTTCGGCCTTTGGCGATGCGGGGCTGGTGGCTTATGGCACATCCAAACACGCGGTGCTGGGCATGACCCGCGCGCTGGCCGGCGAGCTTGGCCCCCATGGCGTCACCGCCAATTGCGTGATGCCCGGCGCCATCGACACGCCCATGACCGCGCCCGCCTTTGCCGCCATGCCCGAATATCGCACCCATTGGGAGCAAAAGGCCGCGCTGGGCCGGTTGGGCCAGCCAGAGGATATTGCCGATGTCATCGCCTTTTTGCTGAGCGATGACGCGCGCTTTGTCACCGGGCAGGGATGGATGGTGGACGGCGGGGCAATGACACGGATGTGA
PROTEIN sequence
Length: 238
MAGRLDGRCGLVTGAGSGIGAATARRLRQDGAQVLTADLRGEVDLLLDVTARDAGKALTEAAMARFGRLDFVVPCAGVSAFCPLAGHSDDYFEQVMAVNVTAVFRLIRDAAPHLCASPAGRIVTIGSVTSAFGDAGLVAYGTSKHAVLGMTRALAGELGPHGVTANCVMPGAIDTPMTAPAFAAMPEYRTHWEQKAALGRLGQPEDIADVIAFLLSDDARFVTGQGWMVDGGAMTRM*