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scnpilot_p_inoc_scaffold_1397_1

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(109..1128)

Top 3 Functional Annotations

Value Algorithm Source
Sex pilus assembly and synthesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8U6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 336.0
  • Bit_score: 521
  • Evalue 5.60e-145
Sex pilus assembly and synthesis protein {ECO:0000313|EMBL:EGD59311.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 336.0
  • Bit_score: 521
  • Evalue 7.80e-145
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 336.0
  • Bit_score: 462
  • Evalue 8.70e-128

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACTAGGTTCCTCGGCAGTCTCATCGCCTTCCTGCTGCTCGTTGCCGGGCAAAGCGCGCAGGCGCAGGTCAATGCCACCTGCCATGGCCATTTCCCCAACCCGATCACCGATGTCTGCTGGGGCTGCTTTTTCCCGCTGACGATTGGCCCGGCCACGCTCTGGGGTTCCGAGCGCGCCGATGCTTCGGACAATCCCGTGCTGCCGATATGTCTGTGCGGTTCGCCGATCCCGCGCATCGGGCTTTCCTTCGGCTTCTGGGAGCCGGTGCGGATGATCGATGTCACCACCAAACCCTTCTGTTTTCCCAATCTGGGCGGGCTCAAGCTCAATCCGGGTCTCTCGCTCGGCAATGGTCAGGTCAAACATGCTCAGATGAAAGGCGGTGGCGGGCAGTTCTCGGCCAATCTGCAGGTCCATTATTACGTCTTCCCGCTGTTCTATCTCCTTGAACTCCTGAATGACTTTCTCTGCTTCGAGCAGGCCTCGTTTGATGTCGCCTATCTCTCCGAGATCGACCCGACCTGGGGCGATGATGCGCTGGCCGCTCTGGTCTATCCCGAAGGCGCGCTGTTCGCCTTTCCGATCGCGCAGGCGGCCTGCGCTGCCGATTGCGTGGCGGCCACCGCCCATCTGCCGCTCGACCAGCTCTTCTGGTGCTCAGGCTGCAATGGCGCGATGTATCCGCTTGCCGGCAATATCGGCAATGCGGTGACGATGGAGCAGTCGATGCGGCTCGCGGCCGAACGCATGGTCTATAAGATGCACCGCACCGCGCTCGCCTGGGGCACGATGGGAAGCCGGGGCCTGTGCGGCAAATATGTGATGCCGATGCTCAGGAAGCAGCAATACCGGCTCCAGATGATCAATCCTAACCCGACAGTCTCGGGCCGGGAGGCTTGCTCGCCGCTCGGCGGTTCGACCGCGCTCCCGCAATCGGGCCATACCTATCCGGTGGTCGGCGAGGATGTGGGCTATCTGCTGTGGCGCAAGCGCAATTGCTGCGCGCGAGCGCCGTGA
PROTEIN sequence
Length: 340
MTRFLGSLIAFLLLVAGQSAQAQVNATCHGHFPNPITDVCWGCFFPLTIGPATLWGSERADASDNPVLPICLCGSPIPRIGLSFGFWEPVRMIDVTTKPFCFPNLGGLKLNPGLSLGNGQVKHAQMKGGGGQFSANLQVHYYVFPLFYLLELLNDFLCFEQASFDVAYLSEIDPTWGDDALAALVYPEGALFAFPIAQAACAADCVAATAHLPLDQLFWCSGCNGAMYPLAGNIGNAVTMEQSMRLAAERMVYKMHRTALAWGTMGSRGLCGKYVMPMLRKQQYRLQMINPNPTVSGREACSPLGGSTALPQSGHTYPVVGEDVGYLLWRKRNCCARAP*