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scnpilot_p_inoc_scaffold_1397_7

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3656..6202)

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7R9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 847.0
  • Bit_score: 1205
  • Evalue 0.0
Type-IV secretion system protein TraC {ECO:0000313|EMBL:EGD59306.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 847.0
  • Bit_score: 1205
  • Evalue 0.0
Type-IV secretion system protein TraC similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 840.0
  • Bit_score: 928
  • Evalue 1.80e-267

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2547
ATGTTCTCGCGCCTTTTTGAAATGATCACCGGCGACGCGCGCCTGCCCGAACGCAAGGCAGCGATTGGCGATGTACCGATGCTGGCTGATCGCATCGGCTACCGCGCCTATGATCCCGACAAGCAATTGTTCCATCTCACCCAGTCCAAAGGCTTCATCCTCGAGATCTGCCCCCTGAACGGTGCTGACGAGCGGGTCGGCGATATTCTGACCACGATCTTTGCCGATCAGCTGCTTCCCGGCAGCGAGTTTCAGGTGATCAACTTTGCCTCGCCCCGCGTCGCAGAAAACCTGCAAGGCTGGGCGTGGGAGCGGGTCAAGGCGGGCGGGGTGTTCGATCGGCTCGCGCGCTATCGTCTTGATCTGCTGCGCGGCGGGGCCTGGCAGAGCCTCGCCAGCGATGGTCCCTTTGTCCTGCGCAATTTTCGCGTGCTCCTGAGCGTCGGCGCGCGTGAGGGGGCTGGGTTGACCAGCGAAGATCTCCTGCAAATGCGCGAGGGGCTGATCTCGGCGCTTGATTCGATCGATGTGGCAAGCCGGATCCTCGATCCGACTGATCTCATCCGCTATATTGACGATCTGCTCTGCCCCTCGAGCGGGGCGGGCGATGACGTGCCCGACTGGTCGCCGCGCGATCCGATCAACGAGCAATGCGTGCGCCGCGATCTCGTCACGCGGGTCGACAAGGACCGGGTGGTTCTTGAAGCCCCTTCTTTGCGCGCCACCGGCGAACTGGTCGATGGCATGCCTGAACTGGCCGATTATGCGCCCGACCGCTTTGATGTGCGGACCTTTGCCGTGCGCCATTGGCCGCGCGTCTGGACGCCCTGGGATGCGACCCGCGTCGTCGGCGATCTTTTCAACCCCAAAATGTGCCTGCCTTGCCCTGTGGTGCAATGCCTCTCCGGAATCATGCCCTCGCTCGAAAGTTCGGAAACCAATGCGGGCTATAAATTTGCCCGCACGCGCTCGCTCGCTGACGGCACCGGCGCCAAGCTCGTCCCCTCCATCCGCACAGCGGCCGCCGAATGGGAACATGTCCAGCAGCAGGTCCTGCTCGGGCAAAAGCTGGTGCAGATCTATTACTGCGTGACCATGCTCGCGCCGATGGGCAAGGGCGATACTCATGCCCGCACGATCAAGGCGCTTTACAAAGCCTGCGGCTGGGATCTGGCGGATGAGACCTATCTCCATCTGCTCGGCCTGTTCGCCGCTATGCCTTTGCTGCTGCCCGACGGCCTGTCGAGCGACCTCAGACGCTTCAAGCGGCTGCGCAAGGTCTTGTCCGAAAACATCGCCGCGCTTGCCCCCTTGCAGGGTGAATATAATGGCGGGCCGATCCCGCATCTCCTGCTTGTCGGGCGGCGCGGGCAGCCGCAATATTGGTCGCCCTTCCAGAATGCTTCGGGCAACCACAATGTCGCGATTGCCGGCAAATCGGGTTCGGGCAAATCGGTGCTGCTTCAGGATCTGACCGCCAGCCTTGCCGGGGTGCGCGCCAAAGTCATCGTCATCGATGATGGCCGCTCGTTTGAACATATGGCGCTGGCGCTGGGCGGACGGTTCACCGAGTTCAACATTGCCGCCGGCATCTCGATCAACCCGTTCCGGATGATCGATGCGGCACTCGCCGGCGAAGATGAGGATTATCTCGTCGATTGCCTGGCGATGCTCAAAGCGATCATTGCCCAGATGGCGCGGTTTGAGGACCGGCTGAATGACACCGAGCGCGGTCTCATCGACAAAGCGGTCAACACGGTCTGGGCGGCCTCGGGGCGCGACGGCACGGTTGATCAGATCATTGCCGTGCTGAGCGACGAGGGCGATCACCCGCTGGCGCGCGATCTGGCGCTCGGGCTCCACCCTTTTTCTGCGCAAGGCACGTATGGGCGCTTCTTTCTGGGCGAGGCCAATCTCGATCTCTCGGCCGATCTCACCGTCTTTGAACTCTCCGATCTGGCCTCGCGGCGCGAGCTGCGCAGCGTGGTGCTGACCGCGATCATGTTTGTCGCTTCGCAAGCGATGCGCAAGCTCGACCGGCAAATTCCCAAAGCGCTGATCATCGATGAGGCCTGGCAGATGCTGGTGGGCGGGGCGATGGCCGATTTTGTCGAGGCCTATGCGCGCACCTGCCGCAAATATGGCGCTTCGCTGGTCACCGCGACCCAGTCGGTCAACGACTTCTACAAATCCGCCGGATCGCAGGCTGCCTTTGAAAACTCTGACTGGGCGCTGCTGCTCCAGCAGAAGGCCGAGAGCATTGCCGATATCCGCAAATCTGCACGCTTCGACATGAGCACCTATACCGAGACGCTGCTCAGGAGCCTCAAGCGTCAGGGTTCGGAATATTCCGATATTCTGGTGCGCGGCCCCGATGGCGAATTCGTCGGGCGGCTGGTGCTCGATCTTTATTCAGCCACGCTCTATTCCTCGAGCCCCAAGACTTTTCAGCGGATCGAGGCGGCGGTGGCCGCAGGGTACGGCATGGCCAACGCCATCGAGATCGTCGCCTTTGACCGGGATCTGGCCGGGGAGGCGGCGGCATGA
PROTEIN sequence
Length: 849
MFSRLFEMITGDARLPERKAAIGDVPMLADRIGYRAYDPDKQLFHLTQSKGFILEICPLNGADERVGDILTTIFADQLLPGSEFQVINFASPRVAENLQGWAWERVKAGGVFDRLARYRLDLLRGGAWQSLASDGPFVLRNFRVLLSVGAREGAGLTSEDLLQMREGLISALDSIDVASRILDPTDLIRYIDDLLCPSSGAGDDVPDWSPRDPINEQCVRRDLVTRVDKDRVVLEAPSLRATGELVDGMPELADYAPDRFDVRTFAVRHWPRVWTPWDATRVVGDLFNPKMCLPCPVVQCLSGIMPSLESSETNAGYKFARTRSLADGTGAKLVPSIRTAAAEWEHVQQQVLLGQKLVQIYYCVTMLAPMGKGDTHARTIKALYKACGWDLADETYLHLLGLFAAMPLLLPDGLSSDLRRFKRLRKVLSENIAALAPLQGEYNGGPIPHLLLVGRRGQPQYWSPFQNASGNHNVAIAGKSGSGKSVLLQDLTASLAGVRAKVIVIDDGRSFEHMALALGGRFTEFNIAAGISINPFRMIDAALAGEDEDYLVDCLAMLKAIIAQMARFEDRLNDTERGLIDKAVNTVWAASGRDGTVDQIIAVLSDEGDHPLARDLALGLHPFSAQGTYGRFFLGEANLDLSADLTVFELSDLASRRELRSVVLTAIMFVASQAMRKLDRQIPKALIIDEAWQMLVGGAMADFVEAYARTCRKYGASLVTATQSVNDFYKSAGSQAAFENSDWALLLQQKAESIADIRKSARFDMSTYTETLLRSLKRQGSEYSDILVRGPDGEFVGRLVLDLYSATLYSSSPKTFQRIEAAVAAGYGMANAIEIVAFDRDLAGEAAA*