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scnpilot_p_inoc_scaffold_12165_7

Organism: SCNpilot_P_inoc_Mobile_elements_general

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 3344..3781

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein pilE n=1 Tax=Pseudomonas syringae pv. lachrymans str. M302278 RepID=F3IP18_PSESL similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 143.0
  • Bit_score: 182
  • Evalue 3.40e-43
Tfp pilus assembly protein pilE {ECO:0000313|EMBL:EGH98884.1}; TaxID=629267 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 143.0
  • Bit_score: 182
  • Evalue 4.80e-43
pilE2; Tfp pilus assembly protein pilE similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 149.0
  • Bit_score: 127
  • Evalue 2.80e-27

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Taxonomy

Pseudomonas amygdali → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCGTAAAGTTCAACAAGGTTTCACCCTGATCGAACTGATGATTGTGGTGGCGATTATTGGTATTTTGGCGGCGATTGCGATTCCGGCTTATAAGGATTACACGGTTAAAGCAAAAGTGAGCGAAGTATCATCTTTAGTTTCGCCCGCGCTATTGGGCATGGGCGTCGCTTTTAGCGATGGTACTTTATCTGGTACAACCGACAATGCTGCTCTTGGTCTTGAAGCTGCCGCATCTATTACTAGCAAATATGTAACCAGCGTTACGGCTGATGGAACCAGTGCCACGGCCGGCACTGTTACCGCTGTTTTGCAAGGCTTTAACGATGCTTTGATTGATGGCAAAAACATCGTATGGACGGCGACCTGTGTCAGTGGGGTTGGCTGTACATGGGCTGTGTCGGGAAGTGTTCCCTCAAAGTACTATCCAAAAGCCTAA
PROTEIN sequence
Length: 146
MRKVQQGFTLIELMIVVAIIGILAAIAIPAYKDYTVKAKVSEVSSLVSPALLGMGVAFSDGTLSGTTDNAALGLEAAASITSKYVTSVTADGTSATAGTVTAVLQGFNDALIDGKNIVWTATCVSGVGCTWAVSGSVPSKYYPKA*