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scnpilot_p_inoc_scaffold_183_24

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(36899..38347)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J834_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 475.0
  • Bit_score: 600
  • Evalue 1.70e-168
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 475.0
  • Bit_score: 600
  • Evalue 4.90e-169
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:AEL28703.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 475.0
  • Bit_score: 600
  • Evalue 2.50e-168

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Taxonomy

Cyclobacterium marinum → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1449
ATGAAGACTAAATCAAGATACAGCTTAGTTGCAATAATTGTGCTGATGCTTGTTGTTTTGGGGTGTAACAGCTCCAAAACAACACTTCAGGACGAAGTGATCAATGACGGTAAAAAATACAGTCCTGCCAGCTTTTCCGATACAACGAAGGACACCGTTACCATTGCTGATGTAAACTGGAAAAAAGTGTTTTCAGACCCGAATCTGGTCGCGTTGATAGATACCGCTTTAAAAAATAACCAGGAGCTGAATATTACGCTGCAGGAGATCCAGATTGCTAAAAGTGAAGCGAGAGTGAGAACCGGAGAGTATCTTCCTCAGGCAGGTCTGAAATTAGGTGCCGGAATGGAAAAGCCGGGAGAATTTACCCGTGACGGAGCCGTTGAGAAGCAGCTGGAAGTGCAACCGGGAAAGGCTTTTCCGGAACCTTTAGGTGATTTTATGATTGGGGCTTACTTTTCATGGGAAGTAGATATCTGGAAAAAGCTTCGTAACAGTAAAAAAGCAGCCGTTTACCGTTATTTGGCATCTATTGAAGGTAAAAACTTTATGATCACCAACCTGGTGGCGGAGATAGCCGGTTCTTACTATGAATTAGTCGCCTTAGATAATCAGCTGGAAATCATTAATAAGAATATAGAGATTCAATCGAGCGTACTGAATGTGGTGAAGCAGCAGAAAGATGCGGGAAGAGTTTCCCAGCTTGCAATTAACCGTTTTGATGCGCAATTGTTAAATACACAAAATTTGCAGTACGATATTAAACAGCAGATTGTAGAAACAGAGAACAAAATCAATTTCCTGGTGGGAAGATTTCCACAGCCGGTTGTCCGTGATGCTGCAACTTTTAACGATATTGAGCTCGATTCTGTTTATATCGGTATTCCGGCACAATTACTTGAGAATCGTCCGGATATCCGTAAGGCGGAGCAGGAGCTGGTGGCTGCCAAATTAGATGTGAAAGTAGCGAAAGCGAGCTTCTATCCTTCTTTGAGCATCCGTGCCAATGTCGGAATGAACGCTTATAATCCGGGAGTCTGGTTTAATCCGCAGTCGCTGCTGTTTAATTTGCTGGGAGATATTGTTGCTCCGCTGATCAACCGGAACGCGCTGAAGGCAAATAGTATGAGCGCGAATGCAAAGCAGGTGCAGGCAGCTTACAATTATCAGCAGACAATCCTGAAAGCTTATACGGAAGTTGTTAATCAGCTGTCGGGAATAAGAAATTACACAAGTAGTTATAATACTAAATCGAAAGAGGTAGAGATACTGAATCAGTCAGTGACTATTTCAAACAATTTGTTTTCCTCTGCCAGAGCAGATTATATGGAAGTACTGCTGACACAGCGGGAAGCATTACAATCGCGTATGGAGCTTGTGGAAATCAAATTGAAACAGATGAATTCCAAAGTTGGTGTTTACAAGGCATTGGGAGGAGGCTGGAAATAG
PROTEIN sequence
Length: 483
MKTKSRYSLVAIIVLMLVVLGCNSSKTTLQDEVINDGKKYSPASFSDTTKDTVTIADVNWKKVFSDPNLVALIDTALKNNQELNITLQEIQIAKSEARVRTGEYLPQAGLKLGAGMEKPGEFTRDGAVEKQLEVQPGKAFPEPLGDFMIGAYFSWEVDIWKKLRNSKKAAVYRYLASIEGKNFMITNLVAEIAGSYYELVALDNQLEIINKNIEIQSSVLNVVKQQKDAGRVSQLAINRFDAQLLNTQNLQYDIKQQIVETENKINFLVGRFPQPVVRDAATFNDIELDSVYIGIPAQLLENRPDIRKAEQELVAAKLDVKVAKASFYPSLSIRANVGMNAYNPGVWFNPQSLLFNLLGDIVAPLINRNALKANSMSANAKQVQAAYNYQQTILKAYTEVVNQLSGIRNYTSSYNTKSKEVEILNQSVTISNNLFSSARADYMEVLLTQREALQSRMELVEIKLKQMNSKVGVYKALGGGWK*