ggKbase home page

scnpilot_p_inoc_scaffold_183_25

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(38337..41567)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, inner membrane transporter CmeB n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VN09_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 999.99
  • Bit_score: 1753
  • Evalue 0.0
  • rbh
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:EPR71341.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 999.99
  • Bit_score: 1753
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 999.99
  • Bit_score: 1750
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3231
ATGTTTAGTAAATTCATTCAGCGGCCGGTTCTTGCAATATCGCTTTCTCTGGCTATTATTTTTATGGGGTTTTTAGCGATCAATACGAGACCGATCTCACAATTCCCGGACATTGCACCTCCGCGCGTGAACGTCTTTATTGCCTACCCCGGATCCAGCGCGGATGTACTTGTAAAATCCACTCTGATTCCTCTGGAAAGAGCGATCAATGGTGTTCAGGGAATGCAATATATTATCTCGGATGCGACCAGCGCCGGTGAGGCAACGATTCAGGTCGTATTTGAACCGGGAACGGATCCGAACGATGCCGTCGTAAATATTAAAACGAGAGTCGATCAGGTAATGAATAATCTTCCTCCTCTGGTTCAGAGGGAAGGTGTTATTATTTCTCCGATCCAGCCGAGTATGTTGATGTATGTAAATTTATACAGTACAGACAAACATGCTGATGAGAAATTTCTGTACAACTATGCCAATGTGCATGTGATCCCTGAATTACAGCGTATCCACGGTATGGGGCGTGCGCAAATTCTGGGGAGCCGTCAGTATGCTATGCGAATCTGGCTGAAACCTGACAGAATGAGAGCATACAATGTATCTACGGAAGAGGTGCTGGATGCTGTTGGTGAGCAAAGTATCATCGGCCGTCCGGGACGTTTGGGGCAGAGTTCGGGGAAAACTCCTCAATCTCTGGAATATGTGCTTTCTTATAAAGGACGTTACAGTAAACCGGAAGAATATGCGGATATTATCATCCGCGCGAATGCTGAAGGGGAAAATCTGAAATTGAAAGATGTTGCGGATGTCGAGCTCGGCAGCGAATTCTTTGATATTTATTCCAACAAGGACGGACATCCTTCTGCTTCCATTGTACTGAAACAGAATATTGGAAGTAACGCCAGCAAGGTAATTGAAGGAGTAAAAGAAAAGCTCGAAGAGCTGAAAAATGATTTTCCTCCGGGAATGAATTATGAGATCAATTACGACGTATCCAAATTTGTGGATGCCTCCATCGACAAAGTATTACATACCTTAGTAGAAGCCTTTGTTCTGGTAGCATTAGTAGTGTTCTTATTCCTGGGAGATTTAAGATCTACATTGATTCCGACGATTGCTGTTCCCGTATCGCTGATAGGCGCGTTTGTCTTTATGCAGTTTTTCGGGCTGACCATCAACCTGATCACGCTTTTTGCTCTCGTCTTGGCAATCGGGATTGTCGTTGATGATGCGATTGTGGTGGTGGAAGCCGTCCATGCGAAGATGGAAGAGAAGCACTTGTCACCTTATAAAGCGGTGAAAGAAGTATTAGGAGAGATCAGCGGTGCGATTATCGCTATCACATTGGTAATGACTTCCGTATTTGTCCCTGTTGCATTTATGCCCGGCCCGGTTGGAGTTTTCTACCGGCAGTTTTCGATTACAATGGCAAGCTCGATCATCCTTTCCGGAGTTGTAGCCCTGACGCTGACACCGGTTCTTTGTGCGATGATCCTGAAAAATAATCATGGGAAGCCAAAAAGAAAAACACCTGTCAGTTTATTTATAGGCTGGTTCAACAGGACGTTTGATAAGGTAACAGGAAAATACACCGCCTTGTTGGGAGTGATTGTAAACAGAAAAGTAATTACTTATGGTATTCTGATCGCTTTTGGATTTGGAATTTTTCTGGTCAATGAAAAATTACCGTCCGGATTTATTCCGAATGAAGACCAGGGAATGATTTATGCGATTATACAGACACCTCCGGGAAGTACGCTGGAACGTACGAACGATGTTTCCCGCCAGCTGCAGAAAATCGCGGAAGGAGTGGAAGGTGTACAGTCGGTGACCTCGCTGGCAGGATATGAAATTTTGACGGAAGGTCGCGGTTCAAATGCAGGAACCTGTATCATCAATTTAAAAGACTGGTCAAAACGCAGCAATAATGTGCATCAGGTAATTGAGGAATTAGAAGGAAAAACAAAAGATCTGGGTGCTGTTGTGGAGTTTTTTGAGCCGCCTGCGGTTCCCGGATACGGTTCATCTGACGGTTTTTCTCTTCGTTTGCTGGATAAAGGCAGTGAAACGGATTATCAGGAATTTGACAAAGTGAATACCGAATTTATGAACGCACTGAGAAAACGTAAAGAACTGGCAGGATTATTTACGTTTTATGCTGCTAATTATCCGCAGTACGAACTGATAATTGACAATAACAAAGCCATGCAGAAAGGTGTTTCTATCGGAAAAGCGATGGACAACCTGGATGTCCTGATAGGAAGTACTTATGAACAGGGTTTCGTCCGCTTTAACACCTTCTTTAAGGTATATACGCAAGCGGATCCTGAATACAGGAAAATGCCGTCTGATATTCTTAATCTCTACGTTAAAAACGACCGGGATGAAATGGTTCCTTATTCAGCGTTTATGACTATGAAAAAAACGCAGGGCCCGAATGAGATCACGCGTTTCAATCTTTATACTTCTTCCTCCATCAGAGGGATTCCTGCACCGGGCTACACTACCGGAGATGCAATTAATGCAATAAAAGAAACGGCGAAACAAACTTTGCCGAATGGATATGATGTAGCGTGGGAAGGCCTTTCTTATGATGAAGCGGCAAGGGGCCATGAAGCAATTTACATTTTTGCGGTGGTAGTATTGTTCGTTTATCTAGTTCTTTCCGCTCAATATGAGAGCTTTATCATTCCATTGGTGGTGATTTTATCCTTGCCGGTCGGTATCTTCGGATCATTTCTGTTGTTGAAAATGATGGGATTAGCCAATGACATCTATGCACAGATCGGATTGATCATGCTGGTCGGATTGCTGGGTAAGAACGCGATTTTGATTGTGGAATATGCTGTTTTGAAGCATCACGAAGGATTGAGCGTTTATGAAGCGGCGATCGAAGGTGCAAAGATGCGTTTCCGCCCGATTTTGATGACCTCCTTTGCATTTATCGCCGGGTTACTTCCGCTGGTTGTTGCTCACGGACCCGGATCCGTTGGTAATCATACGATTGGTTCTTCCGCGTTGGGAGGTATGCTGTTCGGAACTATTTTCGGTGTGATTGTCGTTCCAGGCCTGTACTATATTTTCGGAAAACTGGCAGAAGGAAGATCATTGATCAAAGATCAGGATGAGACTCCTCTGAGCGAAGATATTGCAGGAATCCTGGAAAATGAAAGTAAATGGACCAAAAATGTTAAGAAATTAATCAAAAAAATAACCAGAAGAAATGAAGACTAA
PROTEIN sequence
Length: 1077
MFSKFIQRPVLAISLSLAIIFMGFLAINTRPISQFPDIAPPRVNVFIAYPGSSADVLVKSTLIPLERAINGVQGMQYIISDATSAGEATIQVVFEPGTDPNDAVVNIKTRVDQVMNNLPPLVQREGVIISPIQPSMLMYVNLYSTDKHADEKFLYNYANVHVIPELQRIHGMGRAQILGSRQYAMRIWLKPDRMRAYNVSTEEVLDAVGEQSIIGRPGRLGQSSGKTPQSLEYVLSYKGRYSKPEEYADIIIRANAEGENLKLKDVADVELGSEFFDIYSNKDGHPSASIVLKQNIGSNASKVIEGVKEKLEELKNDFPPGMNYEINYDVSKFVDASIDKVLHTLVEAFVLVALVVFLFLGDLRSTLIPTIAVPVSLIGAFVFMQFFGLTINLITLFALVLAIGIVVDDAIVVVEAVHAKMEEKHLSPYKAVKEVLGEISGAIIAITLVMTSVFVPVAFMPGPVGVFYRQFSITMASSIILSGVVALTLTPVLCAMILKNNHGKPKRKTPVSLFIGWFNRTFDKVTGKYTALLGVIVNRKVITYGILIAFGFGIFLVNEKLPSGFIPNEDQGMIYAIIQTPPGSTLERTNDVSRQLQKIAEGVEGVQSVTSLAGYEILTEGRGSNAGTCIINLKDWSKRSNNVHQVIEELEGKTKDLGAVVEFFEPPAVPGYGSSDGFSLRLLDKGSETDYQEFDKVNTEFMNALRKRKELAGLFTFYAANYPQYELIIDNNKAMQKGVSIGKAMDNLDVLIGSTYEQGFVRFNTFFKVYTQADPEYRKMPSDILNLYVKNDRDEMVPYSAFMTMKKTQGPNEITRFNLYTSSSIRGIPAPGYTTGDAINAIKETAKQTLPNGYDVAWEGLSYDEAARGHEAIYIFAVVVLFVYLVLSAQYESFIIPLVVILSLPVGIFGSFLLLKMMGLANDIYAQIGLIMLVGLLGKNAILIVEYAVLKHHEGLSVYEAAIEGAKMRFRPILMTSFAFIAGLLPLVVAHGPGSVGNHTIGSSALGGMLFGTIFGVIVVPGLYYIFGKLAEGRSLIKDQDETPLSEDIAGILENESKWTKNVKKLIKKITRRNED*