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scnpilot_p_inoc_scaffold_183_68

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 90519..90791

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC94 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 90.0
  • Bit_score: 136
  • Evalue 1.30e-29
DNA-binding protein HU-beta {ECO:0000313|EMBL:GAO31836.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15 similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 90.0
  • Bit_score: 134
  • Evalue 9.30e-29
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 90.0
  • Bit_score: 129
  • Evalue 6.00e-28

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 273
ATGAACAAAGCGGAATTAATCGATGCTATCGCAAACGAGTCTGGTTTGACAAAAACAGACGCTAAAAAAGCTCTAGATGGTTTCATCTCAGCTGTTGGTAAATCTTTAAAAGGTGGTGATAAAATTTCTTTAGTTGGTTTCGGTACTTTCTCTGTTTCTGAAAGAGCAGCTAGAACTGGTAGAAATCCAAGAACTAAAACTGAAATTAAAATCCCTGCTAAAAAAGTTGTAAGATTTAAATCAGGTTCAGAATTATCTGGAAGCGTAAACTAA
PROTEIN sequence
Length: 91
MNKAELIDAIANESGLTKTDAKKALDGFISAVGKSLKGGDKISLVGFGTFSVSERAARTGRNPRTKTEIKIPAKKVVRFKSGSELSGSVN*