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scnpilot_p_inoc_scaffold_183_82

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 108064..108930

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ1_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 288.0
  • Bit_score: 541
  • Evalue 5.80e-151
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 288.0
  • Bit_score: 541
  • Evalue 1.60e-151
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEA45377.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="F similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 288.0
  • Bit_score: 541
  • Evalue 8.10e-151

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGACAGCTCAAAATCACCAAATCGATTACCAATCGTGAGAGTCAATCCCTTGACAAATACTTGCAGGATATTGGTAAAGAGGAATTAATTTCCGCAGAAGAAGAAGTTGAATTAGCACGAAAAATAAAACAAGGTGACCAGCGAGCTTTAGAAAAGCTAACCCGTGCCAACCTCCGTTTCGTAGTTTCTGTTGCAAAACAATATCAAAATCAGGGATTAACACTTCCTGACCTTATCAATGAAGGAAACCTGGGTCTGATAAAAGCAGCACAAAAATTTGACGAAACCCGTGGTTTTAAGTTCATCTCGTATGCCGTATGGTGGATTCGTCAGTCGATTCTGCAGGCATTGGCTGAGCAGGCGCGTATTGTTCGTTTACCTCTGAATCAGGTAGGTTCATTAAATAAGATCAACAAAGCTTTTTCTAAATTAGAGCAGGAATTTGAGCGTCCGCCTTCAGCTGAAGAGCTGGCAGAAGCGCTGGAAGTTCCGGAAGATAAGATCAAGGAAAGCCTTAATGTATCCGGCCGTCACGTATCGATGGATGCACCACTCTCTTCTTCAGAAGACGGAGGTACATTGATGGATGTTATGCCGAACACGGACACACCACGGGCAGACCATTCTCTGATGGCAGAATCCCTGCAAAAAGAAATTGAACGTTCGTTAAGCACACTGACAGATAAAGAACGAGAGATCATCCGCCTGTTCTTCGGGATCGGAATGAACCACGGACTGACACTGGAAGAGATCGGCTCTAAATTCAATCTGACACGGGAACGCGTAAGGCAGATCAAAGAAAAGGCGATCCGCAGGCTCCGACACACGTCGAGAAACAAACTTTTAAAATCTTACTTAGGATAA
PROTEIN sequence
Length: 289
MRQLKITKSITNRESQSLDKYLQDIGKEELISAEEEVELARKIKQGDQRALEKLTRANLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQKFDETRGFKFISYAVWWIRQSILQALAEQARIVRLPLNQVGSLNKINKAFSKLEQEFERPPSAEELAEALEVPEDKIKESLNVSGRHVSMDAPLSSSEDGGTLMDVMPNTDTPRADHSLMAESLQKEIERSLSTLTDKEREIIRLFFGIGMNHGLTLEEIGSKFNLTRERVRQIKEKAIRRLRHTSRNKLLKSYLG*