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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_112

Organism: candidate division WOR-1 bacterium RIFOXYA2_FULL_36_21

near complete RP 46 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 120145..123168

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 1966
  • Evalue 0.0
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) id=14625927 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 998.0
  • Bit_score: 738
  • Evalue 1.10e-209
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 938.0
  • Bit_score: 705
  • Evalue 3.00e-200

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Taxonomy

RIFOXYA2_FULL_WOR_1_36_21_curated → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 3024
ATGCTTCATCAAATTTTAAAAAAATTAAAAGATACTGATGTTTACAATGAAAGTTTGCGTGAAAAAAACTTTTCAGGGCTTATAGGCTCTTCAAAATCATTGGTTGTATCTTCTCTCGCGGAAAAACTTAAAAAGGTAGCCATAATTACAACCTCTTCTTCTGAAGCGCAATGGATAAAAGAAGAGATTTCTGTTTTTTATCCAACACTGACAGTTAGTATTTTGCCTGCTCCAGACGCCCTTTTTTATGGAGAAAAAGTTTCAAAAGAGATTACCGGCAAGAGGCTTAGAGTTTTTGCCGATTTTTTGGCCGAAGATAAAGGGGTTCTTGTTATCCCCTTAAGGTCTGCTATGTATAAAACTTCAGGGACAAGGGATCAGTGGATTGAGCTTTTAAGGGGGGAGAAAGATATAAGGCTTGATAAACTTATAAGCAGGTTGATTGAATATGACTATGAGAGATTGCCGGTTGTCGGAGAGCACGGAGAGTTTTCCGTGAGAGGGGGGATAATCGATATCTTTCCTTCAAATTCTGATTATCCTTTCAGACTGGAATTTTTGGGGGATGAAATAGAATCTATCCGTCCCTTTGATCCCGTAACGCAAAGATCAAAAGAAAAAATTGAAAACATTAAAATATTTAAAAACAATGAAGAGAGAGATGTCTCCCTGCTTTACGCTTTGCCAAAGGAGACAACCTTAATTATTGATGAAAAAAATATCCTTAAAGGAGCTTCGGATCAGCTGATAAAAGATATAAGTCTTTCTCCTGATGTTTTAAAAGATATTGTTCCTTTTATTGAGCTTTTAAAAGAGGCAAAAAAATTTAATCTTTTTTATTTCTCGGGGTTTTTTGAGACGCAAGAAGAACCTCTGTTCTATTCTTCTTCGGATTATACAAACAAAATATCTGTGCTGGAAGAAAAAAGAGATGTTTTAATTGTAACTGAACATCCTTCCCGCTTTAGCCCATCTTTAAAAATTGTGAAAGGACGGATCCGATCGGGGTTTAAATTTGGTGATTGTGAGGTTTTGTCCGATAAAGAGCTTTTTGGAGTGAAAAGTGCGAGGGCGAAAACAGAGACAAAATTGGTTGAAGGGGTAGGCCCCGATATTCGTGCCGATTTTAATATTGGAGATTATGTCGTGCATGAAGACTACGGTGTTGCGATTTATAAGGGGCTCCATAAAATTGAGGAGGGAGAATTCATCCTTCTTGAGTTTGCGGAAAACGACAGGCTTTATGTTCCGCCCCATTCTATGGGTCGGGTTGAAAAATATATTTCTGAAGAGGGATATCGCCCTAAGCTTTCCAGAATGGGAGGGGTGGCATGGAAGGCGATAAAATCTAAAGTAAAAAAATCTGTTCGTGATTTGACAAAAGAACTTTTGGCTTTGTATTCAGAGAGGAAAGAAATAAATAAAATTCCATACTCTCAGGATGACCTATGGCAGAGCGAACTTAAAGATTCTTTTCCATATGAAGAGACCCCCGATCAGTTGAAAGCGATCTCGGACATAAAAAACGACTTGGAATCTGATAAGCCGATGGAGAGGCTTTTGTGCGGGGATGTGGGGTATGGCAAGACAGAGGTTGCAATAAGGGCGATTGTTAAGGTAGCGCAAGCAAATAAGCAGGTGGCCCTCCTTGTTCCTACAACGATTCTGGCGGATCAACATTACCATTACTTGAAAGAGCGGCTCTCTGTTTTTCCTCTAAAGGTTGAGATGCTTTCAAGGTTTAAAAGCAAAGATGAGCAAAAAAAGGTTATTGAGCAATTAAAAAGTGGCGAAATAAATATTATTGTCGGGACCCACAGGCTCCTTCAAAAAGATGTTCATTTTAAAGATATAGGCTTGTTGGTTGTTGACGAAGAACATCGTTTTGGTGTTTCACATAAGGAAAAACTTAAAAAAATAAAAAAGAATATCGATATATTATCAATGACCGCGACCCCCATCCCCAGAACTCTCTATATGTCGCTTGCTGGGACAAGGGATTTAAGTTTAATTCAAACTCCCCCCGCCGACAGATCTCCCATAAGGACATATGTTTCCCCTTTTGATGAAGCGTTGGTTCGAGAGGCTATTCTTAGAGAATTAGATAGAGGGGGACAGATATTTTTTGTCCACAACAGGATAGAGACGATAGATAATATCGCGGCAAAAATAAAAAGACTTGTTCCTGAAGCTAAACTTGTAGTTGCGCATGGGAGAATGAGAGAGATTGACCTCGAGAAGGTTATGGAAAAATTTCTTGATCAAAGATGTGATATTTTATTGTGCACCGCGATTATAGAATCGGGATTGGATATACCAAATGCAAATACTATTTTAATTGATAATGCCCATAAGTTGGGGCTTGCGCAACTTTATCAATTAAGGGGGAGAGTGGGACGCTCGGAAGTTAGGGGATATGCATATCTTTTATATGACCCTAAAGATATTATAGCAGAAAATTCCTTGGCCAGGTTAAAAGCCATCCAGGAATTTATATCGTTAGGATCGGGTTATAGGCTTGCTCTGCGTGATTTGGAGATAAGGGGATCCGGAAATCTTTTGGGGGCACAGCAGCATGGGCATATGCTCTCGGTGGGGTTTGATCTTTATTGTGAGCTTTTGGATGAAGCTGTTAAAGAGATAAAGGGGATAAAAGAGCCGACTCCAAGACAGGTTGTCATCGATGTGGAAAAAGAGGGGTATATCCCGGGAAAATATATTGAAGATGAACAGCAGAGGATAGCTATTTATCGTCGTTTAAACCTTTTATCCTGCTTGGATGAATTGAAAGATTTTAAGGATGAGATAAAAGACCGTTTTGGAAAAATCCCTCAGGAAGTTTTGAAGCTTTTTGATTTTGTCTTTTTAAAGCTAAGCGCCGGTAAGATGGGGATTGTTTCGATTAGGGGGGATAAGAGGATTGTTGTTGAGTGGATAGATGGGAGACAAAAACGGTTTAAAATTGAGGGTAAAGATCGACTAGGAGAGATTGTCGCGAGATTGAAATCAACCCCGATTTCCTAA
PROTEIN sequence
Length: 1008
MLHQILKKLKDTDVYNESLREKNFSGLIGSSKSLVVSSLAEKLKKVAIITTSSSEAQWIKEEISVFYPTLTVSILPAPDALFYGEKVSKEITGKRLRVFADFLAEDKGVLVIPLRSAMYKTSGTRDQWIELLRGEKDIRLDKLISRLIEYDYERLPVVGEHGEFSVRGGIIDIFPSNSDYPFRLEFLGDEIESIRPFDPVTQRSKEKIENIKIFKNNEERDVSLLYALPKETTLIIDEKNILKGASDQLIKDISLSPDVLKDIVPFIELLKEAKKFNLFYFSGFFETQEEPLFYSSSDYTNKISVLEEKRDVLIVTEHPSRFSPSLKIVKGRIRSGFKFGDCEVLSDKELFGVKSARAKTETKLVEGVGPDIRADFNIGDYVVHEDYGVAIYKGLHKIEEGEFILLEFAENDRLYVPPHSMGRVEKYISEEGYRPKLSRMGGVAWKAIKSKVKKSVRDLTKELLALYSERKEINKIPYSQDDLWQSELKDSFPYEETPDQLKAISDIKNDLESDKPMERLLCGDVGYGKTEVAIRAIVKVAQANKQVALLVPTTILADQHYHYLKERLSVFPLKVEMLSRFKSKDEQKKVIEQLKSGEINIIVGTHRLLQKDVHFKDIGLLVVDEEHRFGVSHKEKLKKIKKNIDILSMTATPIPRTLYMSLAGTRDLSLIQTPPADRSPIRTYVSPFDEALVREAILRELDRGGQIFFVHNRIETIDNIAAKIKRLVPEAKLVVAHGRMREIDLEKVMEKFLDQRCDILLCTAIIESGLDIPNANTILIDNAHKLGLAQLYQLRGRVGRSEVRGYAYLLYDPKDIIAENSLARLKAIQEFISLGSGYRLALRDLEIRGSGNLLGAQQHGHMLSVGFDLYCELLDEAVKEIKGIKEPTPRQVVIDVEKEGYIPGKYIEDEQQRIAIYRRLNLLSCLDELKDFKDEIKDRFGKIPQEVLKLFDFVFLKLSAGKMGIVSIRGDKRIVVEWIDGRQKRFKIEGKDRLGEIVARLKSTPIS*