ggKbase home page

RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1168_33

Organism: Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(28588..29877)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 429.0
  • Bit_score: 831
  • Evalue 7.60e-238
RNA polymerase sigma factor id=2110492 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 451.0
  • Bit_score: 675
  • Evalue 5.00e-191
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 433.0
  • Bit_score: 389
  • Evalue 1.50e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGTCTCACAATAATAAAGCAAAAATCAAGAAAAAGCCGGTCCGTCCGGGCCGGGCGGCCAAGTCCGCCAAGAAAGCTCCCGCCAGGAAGCCGGCCAAGAAAGCTCCCGCCAGGAAGCCGGCCAAGAAAGCTCCCGCCAGGAAGCCCTCGAATAAGCCGGTTAAAAAAATTACCCCGGAATCTTTGCCGCGGGAAATAATCTATCCCAAGGAAGACGAGCTGAACAAGCTTATCGCTAAAGGACGATCGCGCGGCTTCGTGACCGAAACGGAGTTATTGTATATTTTCCCCGAAGTAGAGGAATATGTTTTTGACTATGAACTGCTTTTGGAAAAACTTCAGCGGAACGGTATCCAGATAATCGAAGATACCGGCCGGATCCTTGATTTCGAGGAGAAGAAAGAGGAAAAAGAGGAGGCCGGCAAGCTGCCGATCACCAAAAATATCACGGATCTATCGAAGCTAAGCTCCGACTCGATCCAGATGTACCTTAAAGAGATCGGCAAGGTGTCGCTTCTTACCGGCGACGAGGAAGTGGAACTCGCCAAGCGCAAGGAAAAGGGGGATAAAGAAGCCGAACGGAAGCTGATCGAAGCTAATTTGCGTCTGGTCGTTTCTATCGCCAAGAAATTTACCGGCGCCAAAGGTCTTTCTTTGTTGGATCTTATTCAGGAGGGCAATATCGGGCTTTTCCGAGCCGTGGAGAAATTCGAATACCGCAAGGGCTATAAATTTTCGACTTACGCCACCTGGTGGATCAGACAGGCTATTACCCGCGCTTTGGCCGACCAGTCGCGGACGATCCGCATTCCCGTCCATATGGTCGAAACGATCAATCGCTTCCAGCAGATCCAGCGGCAATTGATCCAGGATCTCGGACGCGAGCCCCTGCCCGAAGAGATTTCGGCCGAGATGGGCGAAGACATAGAAAAGGTCCGGCATATCATCAAAATATCCCAGGATACGATCTCTTTGGAGACGACCGTGGGCGAGGACGAGGAAGATTCCACTCTCGAGGATTTTATCGAGGACGTCAAGAACGTGACTCCGGACCGGAGCGCCGCCCTGCAACTCCTTAAGGATTATGTCAAAGAGGTCATTATCCAGCTAAGCCCGCGTGAGCAGAAGATCCTGGAAATGCGTTTCGGCCTGGAAGACGGCGTGGCTCATACGCTCGAGGAGGTCGGCCGCGAATTTGACGTTACCCGCGAACGCATCCGGCAGATAGAAGCGAAGGCTCTGGAAAAGATCCAGAAGCACGAAGGGATCATAAAATTAAAGGATTATTGA
PROTEIN sequence
Length: 430
MSHNNKAKIKKKPVRPGRAAKSAKKAPARKPAKKAPARKPAKKAPARKPSNKPVKKITPESLPREIIYPKEDELNKLIAKGRSRGFVTETELLYIFPEVEEYVFDYELLLEKLQRNGIQIIEDTGRILDFEEKKEEKEEAGKLPITKNITDLSKLSSDSIQMYLKEIGKVSLLTGDEEVELAKRKEKGDKEAERKLIEANLRLVVSIAKKFTGAKGLSLLDLIQEGNIGLFRAVEKFEYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINRFQQIQRQLIQDLGREPLPEEISAEMGEDIEKVRHIIKISQDTISLETTVGEDEEDSTLEDFIEDVKNVTPDRSAALQLLKDYVKEVIIQLSPREQKILEMRFGLEDGVAHTLEEVGREFDVTRERIRQIEAKALEKIQKHEGIIKLKDY*