| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| NusA antitermination factor | rbh |
KEGG
DB: KEGG |
48.6 | 393.0 | 354 | 4.00e-95 | hor:Hore_07820 |
| NusA antitermination factor | similarity |
KEGG
DB: KEGG |
48.6 | 393.0 | 354 | 4.00e-95 | hor:Hore_07820 |
| NusA antitermination factor n=3 Tax=Clostridium thermocellum RepID=A3DE47_CLOTH (db=UNIREF evalue=2.0e-86 bit_score=323.0 identity=60.47 coverage=61.219512195122) | similarity |
UNIREF
DB: UNIREF |
60.47 | 61.22 | 323 | 2.00e-86 | hor:Hore_07820 |
| seg (db=Seg db_id=seg from=92 to=111) | iprscan |
interpro
DB: Seg |
null | null | null | null | hor:Hore_07820 |
| seg (db=Seg db_id=seg from=124 to=135) | iprscan |
interpro
DB: Seg |
null | null | null | null | hor:Hore_07820 |
| seg (db=Seg db_id=seg from=45 to=64) | iprscan |
interpro
DB: Seg |
null | null | null | null | hor:Hore_07820 |
| coiled-coil (db=Coil db_id=coil from=91 to=112 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | hor:Hore_07820 |
| seg (db=Seg db_id=seg from=392 to=408) | iprscan |
interpro
DB: Seg |
null | null | null | null | hor:Hore_07820 |
| NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=20 to=389 evalue=4.0e-139 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: transcription regulator activity (GO:0030528)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.00e-139 | hor:Hore_07820 |
| TRANSCRIPTION TERMINATION FACTOR NUSA (db=HMMPanther db_id=PTHR22648 from=12 to=408 evalue=1.9e-104) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.90e-104 | hor:Hore_07820 |
| Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=246 to=323 evalue=4.3e-32 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.30e-32 | hor:Hore_07820 |
| no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=260 to=338 evalue=7.1e-29 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta) | iprscan |
interpro
DB: Gene3D |
null | null | null | 7.10e-29 | hor:Hore_07820 |
| no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=24 to=196 evalue=1.6e-28 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.60e-28 | hor:Hore_07820 |
| Transcription factor NusA, N-terminal domain (db=superfamily db_id=SSF69705 from=17 to=173 evalue=5.1e-26 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.10e-26 | hor:Hore_07820 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=178 to=245 evalue=4.5e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.50e-18 | hor:Hore_07820 |
| NusA_N (db=HMMPfam db_id=PF08529 from=116 to=171 evalue=4.4e-17 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.40e-17 | hor:Hore_07820 |
| Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=325 to=388 evalue=4.7e-17 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.70e-17 | hor:Hore_07820 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=197 to=259 evalue=1.5e-16 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.50e-16 | hor:Hore_07820 |
| NusA_N (db=HMMPfam db_id=PF08529 from=21 to=108 evalue=4.0e-14 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: protein binding (GO:0005515), Biological Process: regulation of transcription termination (GO:0031554)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.00e-14 | hor:Hore_07820 |
| no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=338 to=390 evalue=6.0e-14 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.00e-14 | hor:Hore_07820 |
| no description (db=HMMSmart db_id=SM00316 from=180 to=246 evalue=3.8e-09) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.80e-09 | hor:Hore_07820 |
| S1 (db=HMMPfam db_id=PF00575 from=179 to=235 evalue=1.3e-07 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-07 | hor:Hore_07820 |
| KH_1 (db=HMMPfam db_id=PF00013 from=351 to=386 evalue=0.00025 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.50e-04 | hor:Hore_07820 |
| no description (db=HMMSmart db_id=SM00322 from=347 to=406 evalue=0.038 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.80e-02 | hor:Hore_07820 |
| no description (db=HMMSmart db_id=SM00322 from=276 to=339 evalue=8.8 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 8.80e+00 | hor:Hore_07820 |
| KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=348 to=409 evalue=9.98 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 9.98e+00 | hor:Hore_07820 |
| S1 (db=ProfileScan db_id=PS50126 from=182 to=246 evalue=12.214 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.22e+01 | hor:Hore_07820 |
| cth:Cthe_0994 NusA antitermination factor; K02600 N utilization substance protein A alias=ACD11_1902.43767.28G0038,ACD11_1902.43767.28_38,ACD11_C00005G00038 id=2441 tax=ACD11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 786 | 4.60e-225 | hor:Hore_07820 |
| Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 409.0 | 786 | 1.60e-224 | K2FYU5_9BACT |
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