Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
hypothetical protein | similarity |
KEGG
DB: KEGG |
32.9 | 359.0 | 195 | 2.00e-47 | sox:TM7x_01245 |
RNA polymerase sigma factor n=1 Tax=Enterococcus faecium 1,231,501 RepID=C9B9Y0_ENTFC (db=UNIREF evalue=1.0e-08 bit_score=64.3 identity=43.06 coverage=20.2857142857143) | similarity |
UNIREF
DB: UNIREF |
43.06 | 20.29 | 64 | 1.00e-08 | sox:TM7x_01245 |
seg (db=Seg db_id=seg from=2 to=13) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_01245 |
seg (db=Seg db_id=seg from=173 to=185) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_01245 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=9 to=95 evalue=1.2e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-15 | sox:TM7x_01245 |
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=23 to=75 evalue=1.6e-13 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-13 | sox:TM7x_01245 |
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=9 to=95 evalue=2.6e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.60e-13 | sox:TM7x_01245 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=48 to=63 evalue=1.2e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.20e-09 | sox:TM7x_01245 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=63 to=74 evalue=1.2e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.20e-09 | sox:TM7x_01245 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=27 to=39 evalue=1.2e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.20e-09 | sox:TM7x_01245 |
RNA_pol_delta (db=HMMPfam db_id=PF05066 from=228 to=288 evalue=5.8e-06 interpro_id=IPR007759 interpro_description=DNA-directed RNA polymerase delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.80e-06 | sox:TM7x_01245 |
RNA polymerase sigma factor {ECO:0000313|EMBL:EKE16247.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 349.0 | 686 | 1.90e-194 | K2F447_9BACT |