Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsD; 30S ribosomal protein S4 | similarity |
KEGG
DB: KEGG |
52.1 | 213.0 | 231 | 2.00e-58 | cap:CLDAP_03840 |
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=210 evalue=2.8e-72 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.80e-72 | cap:CLDAP_03840 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=210 evalue=3.3e-60) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.30e-60 | cap:CLDAP_03840 |
no description (db=Gene3D db_id=G3DSA:1.10.1050.10 from=1 to=111 evalue=2.5e-35) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.50e-35 | cap:CLDAP_03840 |
no description (db=HMMSmart db_id=SM00363 from=99 to=157 evalue=1.6e-17 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.60e-17 | cap:CLDAP_03840 |
S4 (db=HMMPfam db_id=PF01479 from=100 to=146 evalue=1.7e-17 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-17 | cap:CLDAP_03840 |
Ribosomal_S4 (db=HMMPfam db_id=PF00163 from=3 to=97 evalue=4.8e-10 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.80e-10 | cap:CLDAP_03840 |
30S RIBOSOMAL PROTEIN S4P (db=HMMPanther db_id=PTHR11831:SF4 from=97 to=136 evalue=1.4e-08) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.40e-08 | cap:CLDAP_03840 |
30S 40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR11831 from=97 to=136 evalue=1.4e-08 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.40e-08 | cap:CLDAP_03840 |
S4 (db=ProfileScan db_id=PS50889 from=99 to=162 evalue=14.314 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.43e+01 | cap:CLDAP_03840 |
ribosomal protein S4; K02986 small subunit ribosomal protein S4 alias=ACD11_4244.102628.29G0078,ACD11_4244.102628.29_78,ACD11_C00009G00078 id=3029 tax=ACD11 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 421 | 2.00e-115 | cap:CLDAP_03840 |
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 210.0 | 421 | 6.80e-115 | K2FDA5_9BACT |