Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
seryl-tRNA synthetase | similarity |
KEGG
DB: KEGG |
44.1 | 440.0 | 373 | 1.20e-100 | tpk:JO40_01735 |
seryl-tRNA synthetase | rbh |
KEGG
DB: KEGG |
44.1 | 440.0 | 373 | 1.20e-100 | tpk:JO40_01735 |
Seryl-tRNA synthetase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E0_PAESJ (db=UNIREF evalue=4.0e-94 bit_score=348.0 identity=42.12 coverage=95.7110609480813) | similarity |
UNIREF
DB: UNIREF |
42.12 | 95.71 | 348 | 4.00e-94 | tpk:JO40_01735 |
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tpk:JO40_01735 |
seg (db=Seg db_id=seg from=65 to=91) | iprscan |
interpro
DB: Seg |
null | null | null | null | tpk:JO40_01735 |
Serine-tRNA ligase (db=HMMPIR db_id=PIRSF001529 from=1 to=442 evalue=1.2e-162 interpro_id=IPR002317 interpro_description=Seryl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: seryl-tRNA aminoacylation (GO:0006434)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 1.20e-162 | tpk:JO40_01735 |
SERYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11778 from=98 to=438 evalue=6.9e-135 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.90e-135 | tpk:JO40_01735 |
serS: seryl-tRNA synthetase (db=HMMTigr db_id=TIGR00414 from=1 to=431 evalue=1.4e-134 interpro_id=IPR002317 interpro_description=Seryl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: seryl-tRNA aminoacylation (GO:0006434)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.40e-134 | tpk:JO40_01735 |
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=104 to=433 evalue=9.4e-106) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.40e-106 | tpk:JO40_01735 |
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=112 to=432 evalue=6.1e-78) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.10e-78 | tpk:JO40_01735 |
tRNA-binding arm (db=superfamily db_id=SSF46589 from=1 to=111 evalue=2.0e-28 interpro_id=IPR010978 interpro_description=tRNA-binding arm GO=Molecular Function: nucleotide binding (GO:0000166)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.00e-28 | tpk:JO40_01735 |
tRNA-synt_2b (db=HMMPfam db_id=PF00587 from=173 to=358 evalue=1.6e-27 interpro_id=IPR002314 interpro_description=Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418 | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-27 | tpk:JO40_01735 |
TRNASYNTHSER (db=FPrintScan db_id=PR00981 from=366 to=382 evalue=1.9e-26 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-26 | tpk:JO40_01735 |
TRNASYNTHSER (db=FPrintScan db_id=PR00981 from=277 to=289 evalue=1.9e-26 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-26 | tpk:JO40_01735 |
TRNASYNTHSER (db=FPrintScan db_id=PR00981 from=289 to=302 evalue=1.9e-26 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-26 | tpk:JO40_01735 |
TRNASYNTHSER (db=FPrintScan db_id=PR00981 from=331 to=344 evalue=1.9e-26 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-26 | tpk:JO40_01735 |
TRNASYNTHSER (db=FPrintScan db_id=PR00981 from=348 to=364 evalue=1.9e-26 interpro_id=IPR018156 interpro_description=Seryl-tRNA synthetase, class IIa, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-26 | tpk:JO40_01735 |
Seryl_tRNA_N (db=HMMPfam db_id=PF02403 from=1 to=105 evalue=1.8e-21 interpro_id=IPR015866 interpro_description=Seryl-tRNA synthetase, class IIa, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: seryl-tRNA aminoacylation (GO:0006434)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-21 | tpk:JO40_01735 |
no description (db=Gene3D db_id=G3DSA:1.10.287.40 from=1 to=103 evalue=3.6e-20 interpro_id=IPR015866 interpro_description=Seryl-tRNA synthetase, class IIa, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: seryl-tRNA aminoacylation (GO:0006434)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.60e-20 | tpk:JO40_01735 |
AA_TRNA_LIGASE_II (db=ProfileScan db_id=PS50862 from=137 to=424 evalue=22.521 interpro_id=IPR006195 interpro_description=Aminoacyl-tRNA synthetase, class II, conserved domain GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.25e+01 | tpk:JO40_01735 |
pjd:Pjdr2_6148 seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] alias=ACD11_4244.102628.29G0100,ACD11_4244.102628.29_100,ACD11_C00009G00100 id=3048 tax=ACD11 species=Paenibacillus sp. JDR-2 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 879 | 4.30e-253 | tpk:JO40_01735 |
Uncharacterized protein {ECO:0000313|EMBL:EKE15700.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 442.0 | 879 | 1.50e-252 | K2FXY3_9BACT |