Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsM; 30S ribosomal protein S13 | similarity |
KEGG
DB: KEGG |
57.7 | 123.0 | 156 | 5.00e-36 | chy:CHY_2284 |
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=88 to=101 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | chy:CHY_2284 |
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=115 evalue=5.5e-64 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 5.50e-64 | chy:CHY_2284 |
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=118 evalue=5.4e-50 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 5.40e-50 | chy:CHY_2284 |
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=123 evalue=2.9e-49) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.90e-49 | chy:CHY_2284 |
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=123 evalue=2.9e-49) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.90e-49 | chy:CHY_2284 |
Ribosomal_S13 (db=HMMPfam db_id=PF00416 from=3 to=109 evalue=5.6e-38 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.60e-38 | chy:CHY_2284 |
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=126 evalue=1.1e-37 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.10e-37 | chy:CHY_2284 |
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=72 evalue=2.0e-20) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.00e-20 | chy:CHY_2284 |
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=73 to=126 evalue=4.9e-15) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.90e-15 | chy:CHY_2284 |
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=112 evalue=38.485 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 3.85e+01 | chy:CHY_2284 |
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 128.0 | 256 | 2.30e-65 | K2F2S9_9BACT | |
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 alias=ACD11_C00009G00076,ACD11_4244.102628.29G0076,ACD11_4244.102628.29_76 id=3055 tax=ACD11 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 255 | 6.80e-66 | chy:CHY_2284 |