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ACD11_9_79 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		47.7 302.0 265 2.50e-68 pmx:PERMA_1224
seg (db=Seg db_id=seg from=227 to=250) iprscan interpro
DB: Seg 		null null null null pmx:PERMA_1224
coiled-coil (db=Coil db_id=coil from=231 to=252 evalue=NA) iprscan interpro
DB: Coil 		null null null null pmx:PERMA_1224
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=19 to=320 evalue=2.4e-111 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 2.40e-111 pmx:PERMA_1224
no description (db=HMMSmart db_id=SM00662 from=19 to=227 evalue=3.4e-70 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 3.40e-70 pmx:PERMA_1224
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=49 to=171 evalue=3.9e-44 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 3.92e-44 pmx:PERMA_1224
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=49 to=170 evalue=6.5e-40 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 6.50e-40 pmx:PERMA_1224
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=5 to=228 evalue=2.0e-26 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 2.00e-26 pmx:PERMA_1224
RNA_pol_L (db=HMMPfam db_id=PF01193 from=29 to=224 evalue=1.2e-21 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 1.20e-21 pmx:PERMA_1224
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=58 to=151 evalue=1.8e-21 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 1.80e-21 pmx:PERMA_1224
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=246 to=310 evalue=1.3e-12 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 1.30e-12 pmx:PERMA_1224
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=251 to=320 evalue=5.1e-12 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 5.10e-12 pmx:PERMA_1224
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=250 to=319 evalue=5.8e-10) iprscan interpro
DB: Gene3D 		null null null 5.80e-10 pmx:PERMA_1224
Q40NW3_DESAC_Q40NW3; (db=BlastProDom db_id=PD001179 from=259 to=320 evalue=4.0e-05 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: BlastProDom 		null null null 4.00e-05 pmx:PERMA_1224
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=4 to=320 evalue=30.461 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.05e+01 pmx:PERMA_1224
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		100.0 320.0 613 2.40e-172 K2FY10_9BACT
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] alias=ACD11_C00009G00079,ACD11_4244.102628.29G0079,ACD11_4244.102628.29_79 id=3061 tax=ACD11 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90 		100.0 null 612 7.10e-173 pmx:PERMA_1224