ggKbase home page

ACD28_55_26 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=101 to=159) iprscan interpro
DB: Seg
null null null null hpk:Hprae_0641
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27) iprscan interpro
DB: TMHMM
null null null null hpk:Hprae_0641
S20: ribosomal protein S20 (db=HMMTigr db_id=TIGR00029 from=22 to=108 evalue=6.7e-21 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
null null null 6.70e-21 hpk:Hprae_0641
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=25 to=105 evalue=3.5e-18 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null null null 3.50e-18 hpk:Hprae_0641
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=24 to=107 evalue=5.9e-18 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
null null null 5.90e-18 hpk:Hprae_0641
no description (db=Gene3D db_id=G3DSA:1.20.58.110 from=27 to=122 evalue=2.7e-17 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: Gene3D
null null null 2.70e-17 hpk:Hprae_0641
RS20_AZOSE_Q5P102; (db=BlastProDom db_id=PD004231 from=33 to=100 evalue=2.0e-05 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: BlastProDom
null null null 2.00e-05 hpk:Hprae_0641
Ribosomal_S20 (db=HAMAP db_id=MF_00500 from=22 to=106 evalue=13.192 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HAMAP
null null null 1.32e+01 hpk:Hprae_0641
protein RpsT Tax=GWA2_PER_44_7 UNIPROT
DB: UniProtKB
100.0 159.0 300 1.00e-78 ggdbv1_4851111
30S ribosomal protein S20 KEGG
DB: KEGG
44.2 86.0 71 3.40e-10 hpk:Hprae_0641
  • SCG Annotations
  • BSCG ribosomal protein S20