| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| 30S ribosomal protein S1 | similarity |
KEGG
DB: KEGG |
40.6 | 352.0 | 289 | 1.90e-75 | sox:TM7x_00695 |
| RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 (db=UNIREF evalue=9.0e-64 bit_score=248.0 identity=39.77 coverage=89.1191709844559) | similarity |
UNIREF
DB: UNIREF |
39.77 | 89.12 | 248 | 9.00e-64 | sox:TM7x_00695 |
| seg (db=Seg db_id=seg from=356 to=385) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_00695 |
| seg (db=Seg db_id=seg from=191 to=209) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=194 to=276 evalue=4.0e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.00e-27 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=81 to=100 evalue=5.2e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.20e-24 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=17 to=35 evalue=5.2e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.20e-24 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=293 to=312 evalue=5.2e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.20e-24 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=105 to=121 evalue=5.2e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.20e-24 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=217 to=238 evalue=5.2e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.20e-24 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=258 to=362 evalue=1.4e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.40e-23 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=195 to=263 evalue=5.7e-21) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 5.70e-21 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=278 to=352 evalue=9.0e-19) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 9.00e-19 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=194 to=263 evalue=3.2e-18 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.20e-18 | sox:TM7x_00695 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=192 to=265 evalue=2.2e-17 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.20e-17 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=277 to=352 evalue=1.6e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-16 | sox:TM7x_00695 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=280 to=378 evalue=2.6e-15 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.60e-15 | sox:TM7x_00695 |
| TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=191 to=315 evalue=6.0e-14) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.00e-14 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=99 to=193 evalue=2.1e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-12 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=16 to=108 evalue=2.8e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.80e-12 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=102 to=178 evalue=4.1e-06 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.10e-06 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=100 to=180 evalue=5.3e-05) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 5.30e-05 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=14 to=84 evalue=0.00017 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-04 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=15 to=84 evalue=0.0068) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 6.80e-03 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=102 to=180 evalue=10.977 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.10e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=17 to=84 evalue=12.282 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.23e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=280 to=352 evalue=19.549 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.95e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=197 to=263 evalue=19.684 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.97e+01 | sox:TM7x_00695 |
| RNA binding S1 protein {ECO:0000313|EMBL:EKD92572.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 385.0 | 753 | 1.40e-214 | K2D3A2_9BACT |
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