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ACD28_156_10

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: 14364..14861

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 160.0
  • Bit_score: 91
  • Evalue 2.00e-16
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY93_BACS4 (db=UNIREF evalue=4.0e-15 bit_score=84.0 identity=33.12 coverage=93.9759036144578) similarity UNIREF
DB: UNIREF
  • Identity: 33.12
  • Coverage: 93.98
  • Bit_score: 84
  • Evalue 4.00e-15
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=7 to=163 evalue=4.9e-31 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.90e-31

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Taxonomy

GWA2_PER_44_7 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGACCGACGATCCGCAACAATTATTTTTAGACGCTTATGATCAGTATTCCGATGCCATTTTTCGTTACCTTTATTTCCGGACGTACGATTCGGAATTGGCTCGGGAACTCATGCAGGAAACGTTTATGAAAACCTGGAATCTTATGTCGCGGGATCAATCCATCACTCATCTGAAAGCATTCCTTTATAAAGTCGCCCATAACACCATGTTGACTCATCTCCGCAAAAAAAAGACACTATCGCTTGATAAGCTGATGGAAAAAGGATTTTCTCCCTCCGTGGATTATGAGCAGGAATATCAGTCTAATATCGCGGCGGAGGGGTTGCTATCCCATGTTCATCAGTTGCCTCAGAAATATCAGGATATCATCAAAATGCGTTACATGGATCAGCTTTCGTTGAAAGAAATGTCGACTATTTTGGCGCTTTCTGAAAATGTTTTGTCCGTTCGACTGCATCGCGCTCTTAAAAAGTTAAAATTAACCTTCCCGTTATGA
PROTEIN sequence
Length: 166
MTDDPQQLFLDAYDQYSDAIFRYLYFRTYDSELARELMQETFMKTWNLMSRDQSITHLKAFLYKVAHNTMLTHLRKKKTLSLDKLMEKGFSPSVDYEQEYQSNIAAEGLLSHVHQLPQKYQDIIKMRYMDQLSLKEMSTILALSENVLSVRLHRALKKLKLTFPL*