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RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_2_22

Organism: candidate division WOR-1 bacterium RIFOXYB2_FULL_46_45

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 9 / 38 MC: 1
Location: comp(15602..16270)

Top 3 Functional Annotations

Value Algorithm Source
fliA; RNA polymerase sigma factor for flagellar operon fliA; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFOXYA12_FULL_WOR_1_43_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 435
  • Evalue 3.70e-119
RNA polymerase sigma factor id=1959940 bin=GWE2_RBX1_39_32 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 227.0
  • Bit_score: 122
  • Evalue 6.40e-25
fliA; RNA polymerase sigma factor for flagellar operonfliA similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 227.0
  • Bit_score: 120
  • Evalue 5.30e-25

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Taxonomy

RIFOXYA12_FULL_WOR_1_43_27_curated → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 669
ATGCCTTTGGTGCATTCTATAGCTTCGATGGTTTCGGGGAAGGGGCTTCCTCCGAATGTCGATTATAACGACCTGGTTTCGGACGGCACCGTCGGACTGATGAAGGCCTGGGAAAAGTTTGATCCCGACCGCGGGGTAAAGTTTGAGACCTACGCGTCGTACCGGGTTCGCGGCGAGATTTTGGACGGCCTGAAAAATTACAGCCCGGTTCCCTACCGGGTGCAGGTGATGATCAGGGACCTGGCGAAAAAAGGGTATAAGGAAACGGTTAAGTCCCGCATTACAAAAAGAGAAGAGAAGCTGCTGGAAAAGAAAGAGCTTTCGGAATCAGAATTTAAGCTGGCGGTCAACAGGGTGAAGAAGATCGTTTCGGCATCGGCCTTGATGTATTTGATGTCGCTTGAAGATTTGTCGGCCAGAATGGAAGTGAACGTTGAGGGGGAAAGGGGGCCGGTTGATGAGCTGGAATTTAAGGAACTGAAAGAACGGCTGGTTTCGGTGATCGGGGTCCTTCCCAAAAACCAGCGCGATGTCGTTGACCTGTTTTTTAATAAAGGATTGAAGCAGAATGAGATCTCAAAAAAATTGGACCTTTCAAAACCCAAGGTCTGCCGGCTTTTGGCCAGGGCGATGAAGCACATTCAACACGAGATAAAGGGAAAAAATTAA
PROTEIN sequence
Length: 223
MPLVHSIASMVSGKGLPPNVDYNDLVSDGTVGLMKAWEKFDPDRGVKFETYASYRVRGEILDGLKNYSPVPYRVQVMIRDLAKKGYKETVKSRITKREEKLLEKKELSESEFKLAVNRVKKIVSASALMYLMSLEDLSARMEVNVEGERGPVDELEFKELKERLVSVIGVLPKNQRDVVDLFFNKGLKQNEISKKLDLSKPKVCRLLARAMKHIQHEIKGKN*