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RIFOXYB2_FULL_Deltaproteobacteria_36_6_rifoxyb2_full_scaffold_89052_4

Organism: Bdellovibrionales bacterium RIFOXYB2_FULL_36_6

near complete RP 47 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38
Location: comp(1363..2058)

Top 3 Functional Annotations

Value Algorithm Source
dapF; putative diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 467
  • Evalue 9.10e-129
Diaminopimelate epimerase n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RD43_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 229.0
  • Bit_score: 176
  • Evalue 2.30e-41
dapF; putative diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 231.0
  • Bit_score: 160
  • Evalue 6.30e-37

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Taxonomy

RIFOXYC1_FULL_Bdellovibrionales_37_79_curated → Bacteroivoracaceae → Bdellovibrionales → Bdellovibrio → Bacteria

Sequences

DNA sequence
Length: 696
TGCCATCGACGATTTGGGGTAGGAGCGGATGGGGTTATTTTTTTGGAAAAATCAGCCAAGTTGGATTTTTCCATGCGGTTTTTTAATGCAGATGGGAGTGCTGCAAGTTTTTGTGGTAATGGGGCACGAGCGATTACTCATTTTGCCCATCATTTGCTTGAGGATAAATCAAGTGATCGTTATACATTTGAGATCAATAACCGGGTTATTAAATCTGAGATATTGGATAGGAATGAGGTGATAGTTGAGATGCCGGCCATCTTTGATTTAGACAAAATCAAACTCAATGAATTTGGCCTTTTTCTTGGTAGCTTGTATGTGGATACGGGTGTTCCCCATGCGGTTTTTATCACGGATGCAGTTTTTTACGATTATGACTTGAAGAGTTTATATAAAAAAGTGAATAAAAACCATAAGCTTTTTCCCCATGGGGTGAATGTTAGCGTTATGGAAGTTATGGATGATGGTTTTATTGCACTTCGCACTCAAGAACGAGGGGTTGAGGATGAAACTTACTCTTGCGGGACGGCGGCAGTGGCGGCAGCCATATTAACGTGTCGATTTAGCGGATTTCATGAGGAAATAAATATACAAGTTAAAGGTGGAAAACTTAAAATATTATTAGATAAAGATTTTAAAAAGATAAAACTGTGTGGAAAAGCTGAAAAAATATTTTGTGGAGAAATTGAAGTATAA
PROTEIN sequence
Length: 232
CHRRFGVGADGVIFLEKSAKLDFSMRFFNADGSAASFCGNGARAITHFAHHLLEDKSSDRYTFEINNRVIKSEILDRNEVIVEMPAIFDLDKIKLNEFGLFLGSLYVDTGVPHAVFITDAVFYDYDLKSLYKKVNKNHKLFPHGVNVSVMEVMDDGFIALRTQERGVEDETYSCGTAAVAAAILTCRFSGFHEEINIQVKGGKLKILLDKDFKKIKLCGKAEKIFCGEIEV*