ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189

Search features with annotation key words

Displaying items 61-90 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_61
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

82912..83505
DNA (594bp) protein (198aa)
Putative uncharacterized protein id=1844385 bin=GWE2_Bacteroidetes_40_63 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_62
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

83667..84539
DNA (873bp) protein (291aa)
id=1763321 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1763321 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_63
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

84691..85245
DNA (555bp) protein (185aa)
hypothetical protein
hypothetical protein MsalJ2_04321 id=1763322 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein MsalJ2_04321 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_64
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

85544..86155
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=1763324 bin=GWD2_Bacteroidetes_40_43 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_65
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

86161..86463
DNA (303bp) protein (101aa)
Putative uncharacterized protein id=2710954 bin=GWC2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_66
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

86468..87091
DNA (624bp) protein (208aa)
Protein-export membrane protein SecD id=1763328 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
protein translocase subunit secF/protein translocase subunit secD Tax=GWE2_Bacteroidetes_40_63_curated
protein translocase subunit secF/protein translocase subunit secD
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_67
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87197..87325
DNA (129bp) protein (43aa)
id=1763330 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1763330 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_68
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87300..87512
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=1763331 bin=GWD2_Bacteroidetes_40_43 species=Bradyrhizobium sp. ORS 285 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_69
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87536..87817
DNA (282bp) protein (94aa)
id=2710937 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
id=2710937 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_70
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87854..88423
DNA (570bp) protein (190aa)
Putative transcriptional regulator, Crp/Fnr family id=1763334 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Crp/Fnr family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
Crp/Fnr family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_71
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

88497..89009
DNA (513bp) protein (171aa)
Polyketide cyclase / dehydrase and lipid transport id=1763335 bin=GWD2_Bacteroidetes_40_43 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
polyketide cyclase/dehydrase and lipid transport Tax=GWE2_Bacteroidetes_40_63_curated
polyketide cyclase/dehydrase and lipid transport
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_72
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89105..90349)
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1763336 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_73
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90421..90981)
DNA (561bp) protein (187aa)
Regulatory protein TetR id=1763337 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_74
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

91376..91741
DNA (366bp) protein (122aa)
id=1763338 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1763338 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_75
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

91745..92296
DNA (552bp) protein (184aa)
Transcriptional regulator, TetR family id=1763339 bin=GWD2_Bacteroidetes_40_43 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TetR family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
TetR family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_76
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

92349..93320
DNA (972bp) protein (324aa)
Iron-sulfur cluster binding protein id=1763340 bin=GWD2_Bacteroidetes_40_43 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
4Fe-4S protein Tax=GWE2_Bacteroidetes_40_63_curated
4Fe-4S protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_77
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

93332..94171
DNA (840bp) protein (280aa)
Putative uncharacterized protein id=1763341 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_78
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(94311..95255)
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=1763342 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hemolysin A Tax=GWE2_Bacteroidetes_40_63_curated
hemolysin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_79
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95342..96175)
DNA (834bp) protein (278aa)
phospholipid/glycerol acyltransferase id=2710893 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
phospholipid/glycerol acyltransferase Tax=GWE2_Bacteroidetes_40_63_curated
phospholipid/glycerol acyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_80
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

96352..98331
DNA (1980bp) protein (660aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1763344 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_81
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98312..99076)
DNA (765bp) protein (255aa)
beta-lactamase domain-containing protein id=1763345 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
beta-lactamase domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
beta-lactamase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_82
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

99369..99830
DNA (462bp) protein (154aa)
cell division protein MraZ id=1763346 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
mraZ protein Tax=GWE2_Bacteroidetes_40_63_curated
mraZ protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_83
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

99830..100729
DNA (900bp) protein (300aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=GWE2_Bacteroidetes_40_63_curated
Ribosomal RNA small subunit methyltransferase H id=3486009 bin=GWF2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
mraW; S-adenosyl-methyltransferase MraW
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_84
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100732..101106
DNA (375bp) protein (125aa)
Putative uncharacterized protein id=1763348 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_85
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

101093..103213
DNA (2121bp) protein (707aa)
cell division protein FtsI/penicillin-binding protein 2 Tax=GWE2_Bacteroidetes_40_63_curated
Peptidoglycan synthetase id=1763349 bin=GWD2_Bacteroidetes_40_43 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
cell division protein FtsI/penicillin-binding protein 2
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_86
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104360..104659
DNA (300bp) protein (100aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWE2_Bacteroidetes_4
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase id=2710686 bin=GWC2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_87
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104662..105912
DNA (1251bp) protein (417aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=GWE2_Bacteroidetes_40_63_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=1763401 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Phospho-N-acetylmuramoyl-pentapeptide-transferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_88
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

105917..107260
DNA (1344bp) protein (448aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=2710682 bin=GWC2_Bacteroidetes_40_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=GWE2_Bacteroidetes_40_63_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_89
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

107286..108491
DNA (1206bp) protein (402aa)
Cell division protein FtsW id=1763407 bin=GWD2_Bacteroidetes_40_43 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
cell cycle protein; K03588 cell division protein FtsW Tax=GWE2_Bacteroidetes_40_63_curated
cell cycle protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_189_90
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

108448..109566
DNA (1119bp) protein (373aa)
murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam
murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase id=3485887 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Displaying items 61-90 of 122 in total

View Taxonomy