ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_104_34

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 45576..46370

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator id=2159641 bin=GWE2_Bacteroidetes_40_63 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 529
  • Evalue 2.10e-147
lexA; transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 529
  • Evalue 2.90e-147
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 264.0
  • Bit_score: 239
  • Evalue 1.20e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 795
ATGGAAAATATTTTAGGGAGCAACATTAAAAACCTTCGGCGCCGGAAAGGGCTCACCCAGGATCAATTGGCCGATAAAATTGGTGTAAACCGCGCCATGATTGGTTCGTACGAGGAAGGACGGGCAACACCAAAACTATCGGCACTTAGCACCATGGCGCATTATTTTGGTGTTACGCTCGATGAGTTGGTAAATACCAATGTTACAATGCTTGCAGAAAACGAACCTGCCAAAACCGATGTTACGGGTAAAAACCTGCGGATACTGACCACACTGGTTGACCGCGATAATCGGGAATTAATTACTTTGGTGCCTGTAAAAGCATCGGCTGGCTATTTAAATGGATATGCCGATCCTGATTTTATTGAAACATTGCCCCGGTTTTCGGTTCCGGTACCTGAACTTAGCCGCGAACGGACCTACCGGGCTTTTCAGATTAAAGGCGACAGCATGGAACCCATTCCCACCGGTAGTTATATTTTGTGTGAATACGTGTTAAACTGGAACGAACTGAAAGAGGGACAATGTTATGTTTTGCTCACCCGCGATGAAGGAGTTGTCTATAAGAGGATTTATAAATCAGACGAAGAAAAATTGTTGTTAAAATCGGATAATCCGGAATATGCCCCGTATGAAGTTCCCATTGAAACGGTTTCGGAAGTATGGAAAGCCTTGGGTTACCTGAGCTTTACCCTGCCCGATGCCCAGGATATGAACCTGAACAAGCTCACCCACATGATGTTTGAGCTTAAAAATGAAATCAATGCCATTAAAAATAAAGGAACCGATTCGTAA
PROTEIN sequence
Length: 265
MENILGSNIKNLRRRKGLTQDQLADKIGVNRAMIGSYEEGRATPKLSALSTMAHYFGVTLDELVNTNVTMLAENEPAKTDVTGKNLRILTTLVDRDNRELITLVPVKASAGYLNGYADPDFIETLPRFSVPVPELSRERTYRAFQIKGDSMEPIPTGSYILCEYVLNWNELKEGQCYVLLTRDEGVVYKRIYKSDEEKLLLKSDNPEYAPYEVPIETVSEVWKALGYLSFTLPDAQDMNLNKLTHMMFELKNEINAIKNKGTDS*