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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_7

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(4576..5145)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4889011 bin=GWC2_Bacteroidetes_40_13 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 379
  • Evalue 2.50e-102
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 378
  • Evalue 4.60e-102
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 180.0
  • Bit_score: 208
  • Evalue 1.30e-51

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
GTGGGAGAGAAATACAAAAATATTCACCAGGAGTTGATTGATGATTGCCGAAATGGTAACACCAAAGCACAATTTGAGATTTATAAATTGTATTACAAAGCCATGTACAACACCTGTCAGCGTTTGGTGAATGACAGCCTTGAAGCCGAAGACATCATGCAGGAGGCATTTTTATCGGCTTTCAGAAACATCCAAACTTACAAGGAGGAGGTCAGTTTTGGGGCATGGCTAAAAAGGATTGTGGTAAACCGTTCTTTGGATTATTTAAAAAAAAGAAGAATAGCGCAGGACCCTCTCGATGATCGCCGTACCTCCATTATTGACGAAGACGATTCAGAGTATTTGGATGATGTTGCGCAAAAGGTGGCCGAGGTTAAACAGGTTATTGTCGAATTGCCGGAAAGCTACCGGGTTCTCATTACCCTCCATTTGATTGAAGGCTTTGATCATGACGAAATCAGTGAAATACTGGGAATGACCAATGCCAATGTCAGAACCACTTATTCGAGGGCACGAAAAAAATTACAAGATATGTTACAAGCTAAAAAAACCGGAATATGGATGAACTGA
PROTEIN sequence
Length: 190
VGEKYKNIHQELIDDCRNGNTKAQFEIYKLYYKAMYNTCQRLVNDSLEAEDIMQEAFLSAFRNIQTYKEEVSFGAWLKRIVVNRSLDYLKKRRIAQDPLDDRRTSIIDEDDSEYLDDVAQKVAEVKQVIVELPESYRVLITLHLIEGFDHDEISEILGMTNANVRTTYSRARKKLQDMLQAKKTGIWMN*