ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_539_17

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(23604..24008)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator id=4083592 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 135.0
  • Bit_score: 268
  • Evalue 3.40e-69
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 268
  • Evalue 4.70e-69
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 132.0
  • Bit_score: 92
  • Evalue 1.20e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGAAAATCATTATTGTGGACGACAACTATTACTTCAGAAAAGATTTAAAGTTTTACCTGGAATCAAAGCTGAACCACAAAGTGATAGGGGAAGCTGGAAGTGGTGAGGAATTTATGGAAATGAAAAACATTCATGAAGCCGATATCATACTAATGGACATTGTCATGGTTAAAATGGATGGATTTACCACGAGCAAAAAAATTACCTATCAGCTACCCACTCTGAAAATTATTGCCATTACCATGCATTTTGAAAATATTTTCTTATTGCGGCTCATGGAATCGGGATTCAAAGGTTTCGTGAATAAAACCGAGATTTTTTCAAAAATAGATTTAGCCATTCACGAAGTATATAATGGAAATCTGTTTTTCCCGGACGACATTTTATCCCGCATTACGGAGTAA
PROTEIN sequence
Length: 135
MKIIIVDDNYYFRKDLKFYLESKLNHKVIGEAGSGEEFMEMKNIHEADIILMDIVMVKMDGFTTSKKITYQLPTLKIIAITMHFENIFLLRLMESGFKGFVNKTEIFSKIDLAIHEVYNGNLFFPDDILSRITE*