ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_5

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 8396..11647

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2206
  • Evalue 0.0
TonB-dependent receptor plug id=1894788 bin=GWD2_Bacteroidetes_40_43 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2206
  • Evalue 0.0
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 999.99
  • Bit_score: 832
  • Evalue 1.70e-238

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3252
ATGAAAAGAAACTTCCTAATACACATTTTTACTTTTCTGTTGCTCAGTGCTGCCTTTACTGCCAATTCGCAAAGTATTACTGTAAGTGGTTTGGTTCGTGACAAAAACACCAGTGAGCCTTTAATTGGTGCTAATATGGTAGAGGTTGACAAAAACGGAAGGTTTTTGAACGGAACAATTACTGATTTAAATGGAAACTACATTATTAAAGTAAGCTCCGGTTCTGCTACTCTACAGGTTTCATTAATTGGTTTTGAAAAACAAATCATTCAGGTTAATAACCGTGCAAAAATTGATGTAACCCTCGAAGAAACCACTTCCCAACTTTCTGAAATTACGATAGTTGGCCAGAAAATGGGGAACGATGGGGTTGTTGCTATCCGTGACCGAGGTACGGCAATTTCCCGAATTGAACTGAAAGAAATGCATTCTTCCATGACCACTTCTGTTGAGGAGATGCTGCAAGGACGTATGGGTAATGTGGATATAACCGCTATTTCTGGAGACCCAGGAGCTGGTTTGAACATCCGTATCCGTGGTACAGCCACCTTAAATGCTAAAAACAGCCCATTAATCGTGATCAATGGGATCCCTTATGACACTCAAATAGATGAGAGCTTTGATCTTGGTAGTGCCGATGTTGAAAAGTTTGGTAGTTTAATTGATGTTGCCCCTGAAAATATTGAATCGATAGAGGTTTTAAAAGATGCCGGTGCTACTGCCATTTGGGGTTCAAAAGCCTCGAACGGGGTTATTATGATTAAAACAAAACGGGGTACCCATTCAAAACCTATTTTTGAATATCAGGCAAAATTTACCACTTCGCATGAACCTGAGGCCATCCCAATGCTCGATGGAGGGGGTTATGCAAAACTTATTGCCGAAGAACATTTTAACCTTGATTCAAGAAATGATTTTATTCAAACCAATCCAGATGCCAATCAGATAGCCTATAATAAAGATTGGGAAGAATATTGGAATTTCGCGCAAAATACAAATTGGATTGATGAAATTACCAAAGTAGCCTTTACCCAGCAACATAACTTTTCCGTCCGTGGGGGGGGTGAAAAATCGGGATACAATGTTTCTACCAACTACCTGGATGAACAAGGTACTACCATTGGTACCCGGTTAAAAAAACTGAACATTGGTACTGCTTTTGACTATACCATTTCAAGCAAACTGAAATTCCAAACCGATGTTATGTACACCCGGTATGACCAGGATGCTACCTACGATTACGAAGACTGGTACTACAAAGACAGTCGCAGCTTGCGTTCATTGGCCTATCGTAAAATGCCAAACTTGTCGGTATATGTCCGCGATACAAACAATGTGGTGTATGATGAATTTTTTACTCCTGAATATACCCTGCAGGGAAGCGCTACCGAAATACCTAACCCTGTTGCGTTTGCTAAAGCCGCAAAACATAAACGTTATAAAGATAATTTCAGGGCAGGTTTTACCTTGAATTATCAGATTAGTGATAAGTTAACAGCAAACTCCATTATTACTCTCGATGTATTTGACTCGAAAATGGAAAAATACCTTCCGTACAACGCAATTGGAGCTTTTTACTACAGTGGAAATACCCGGATGGCAACCAACGAATTCACCAATAAATCGAGTATTTATAACATGACCAAATTGATATACAATCCTATATCAACCAAAGATCATGAACTTACCTTTTTAGGACAGTTTGATGCTGAACTTACAAAAAGCAAAGGTTATTATGTAATCACAAGTTTTTCCTATTCTGAAGATAATCCAACAACCATAGGCAATGAGTCTCCTCCCTCCTATGAAGATGCTAGCTTATCGGAATATCGTTCGATAGGTTACTACGGAAATGTTTTTTATAAATTGAAAGATAAATACATACTTTCAGGTGGGGTAAAAGTCGAAGGAAACTCAAAATATAGCAGGGAAGCCCGTTGGGGTTTGTTCCCAGCAGGTTCTGTTGCATGGCGTATTTCAGAAGAACCCTTCATGAAAAGCATCAAATTCATCGATGATATGAAAATTAGAGGTAGCTGGGGTATTTCAGGAAACTCACCCGATGATAATTACCTGTATTATAACGAGTATGTAGCAGGGCCTGAATATGATTACCTTGGTACCGGAGGCATTGTGCCCAGCAATATGGAATTAACCGGCTTAAAATGGGAAAATATTGAACAATATAATATTGGATTCTCCTTTTTTGGTATAAAAAACAGGTTGAATGTGGAATTTGATATTTATGACAAAACCACCCATAATCTTTTCTTAAAGAATACAAACATCCCTTCCAGTACAGGTTTCAGCACCTATAACACAAACGATGGTTCGTTAAAAAATAAAGGTATTGAATTATCAATCGATTATAAAATAATTGACAAAGAGGATTTTAATCTGAGTTTTAACTTCAATGTAGCACACAATAAAAATGTTGTTGTAGAATTACCGCAGAATTTCTCACAAGAAACGGGTGATATGAATTCGAACGGAGAGTATTTTACCACAGTTACTCCAGGTGAGGCTATTGGTGGTTTTTTTGGGTATAACTTCCTGGGGGTTTACAAAAATGTGGAAGATACTTACGTAAAAGATGCCGATGGAAACTTAGTGTATGAACTTGGCGAAGAAACACCCATGGTCATGATTTTTGGCGCCGATGGGTATGATTTCCGCCCCGGTGACTCTAAATATGAGGATGTGAACCACGATGGTAAAATTGACAAACTGGATATTAAATACCTGGGCGATACCAACCCTAAACTGATGGGAGGTTTTGGTCCAAGGGTAAGGTATAAAAACTTTACTTTCAATATGTTTATTTATTACCGCATTGGTAGCGAAATTATTAACCAAACCCGGATGGATACCGAAAAAATGTATGGCTACGATAACCAGAGTACCGCTACAAACTGGAGGTGGAGAACTGAGGGGCAGGAAACCGATATGCCCCGGGCATTATATGGCGAAGGGTATAACTGGCTGGGGTCAACGCGGTTTGTGGAAGACGGCTCTTTTGTCCGTTTGAAATCTGCATCAATAACCTATGATTTACCCAAAGAATGGATTAAAAAATTCAACATTAAAGACTGTAAGATGTACATAACCGGATATAATCTTTACACCTGGACGAATTATTCCGGACAGGATCCTGAAGTGGGGTTACCCAACCGTCCTGATGAATTACCCAAAGATTATAGCCGGACACCTCCAAGTACCCGTTATACCCTGGGATTATCGTTAACTTTTTAA
PROTEIN sequence
Length: 1084
MKRNFLIHIFTFLLLSAAFTANSQSITVSGLVRDKNTSEPLIGANMVEVDKNGRFLNGTITDLNGNYIIKVSSGSATLQVSLIGFEKQIIQVNNRAKIDVTLEETTSQLSEITIVGQKMGNDGVVAIRDRGTAISRIELKEMHSSMTTSVEEMLQGRMGNVDITAISGDPGAGLNIRIRGTATLNAKNSPLIVINGIPYDTQIDESFDLGSADVEKFGSLIDVAPENIESIEVLKDAGATAIWGSKASNGVIMIKTKRGTHSKPIFEYQAKFTTSHEPEAIPMLDGGGYAKLIAEEHFNLDSRNDFIQTNPDANQIAYNKDWEEYWNFAQNTNWIDEITKVAFTQQHNFSVRGGGEKSGYNVSTNYLDEQGTTIGTRLKKLNIGTAFDYTISSKLKFQTDVMYTRYDQDATYDYEDWYYKDSRSLRSLAYRKMPNLSVYVRDTNNVVYDEFFTPEYTLQGSATEIPNPVAFAKAAKHKRYKDNFRAGFTLNYQISDKLTANSIITLDVFDSKMEKYLPYNAIGAFYYSGNTRMATNEFTNKSSIYNMTKLIYNPISTKDHELTFLGQFDAELTKSKGYYVITSFSYSEDNPTTIGNESPPSYEDASLSEYRSIGYYGNVFYKLKDKYILSGGVKVEGNSKYSREARWGLFPAGSVAWRISEEPFMKSIKFIDDMKIRGSWGISGNSPDDNYLYYNEYVAGPEYDYLGTGGIVPSNMELTGLKWENIEQYNIGFSFFGIKNRLNVEFDIYDKTTHNLFLKNTNIPSSTGFSTYNTNDGSLKNKGIELSIDYKIIDKEDFNLSFNFNVAHNKNVVVELPQNFSQETGDMNSNGEYFTTVTPGEAIGGFFGYNFLGVYKNVEDTYVKDADGNLVYELGEETPMVMIFGADGYDFRPGDSKYEDVNHDGKIDKLDIKYLGDTNPKLMGGFGPRVRYKNFTFNMFIYYRIGSEIINQTRMDTEKMYGYDNQSTATNWRWRTEGQETDMPRALYGEGYNWLGSTRFVEDGSFVRLKSASITYDLPKEWIKKFNIKDCKMYITGYNLYTWTNYSGQDPEVGLPNRPDELPKDYSRTPPSTRYTLGLSLTF*