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RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_885_13

Organism: candidate division WOR-1 bacterium RIFOXYC2_FULL_46_14

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 9 / 38 MC: 1
Location: comp(15169..16386)

Top 3 Functional Annotations

Value Algorithm Source
gspF; general secretory pathway component, cryptic; K02653 type IV pilus assembly protein PilC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 779
  • Evalue 3.20e-222
Type II secretion system F domain id=4213211 bin=GWA2_OP3_52_12 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 402.0
  • Bit_score: 299
  • Evalue 4.10e-78
gspF; general secretory pathway component, cryptic similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 404.0
  • Bit_score: 271
  • Evalue 3.40e-70

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Taxonomy

RIFOXYA12_FULL_WOR_1_43_27_curated → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 1218
TTGAATAAATATATTTATAAGGCCCGAAACGAGATCGGGGAATTGGTGGAAGGGGAATTAAATTCCGTTTCCGCCGAAGCGGCCTCGCTTGAACTGACCAAAAAGAAACTGACCCCGGTCACGGTTGAAGCCAAAGGGCTGATTTTTGATTTTGCCTCCCTCTCTTATTTTTTTTACAGGATCAAGACCCGCGACCTCTCGATTTTTTTCAAGCAAATCGGGACGATCTTTTCGGCGGGAGTCCCCCTTTTTGAAACCTTGACGGCGGTTGAAGAGCAGGTTACCGATAACAACCTGAAAAAAGTAATCGGGCGGATTAAAGACGACATAGAAAGCGGGAGCAGTTTTTCGCAAGCGCTTTCAAAGCATCCCAGGGTTTTTTCTCACCTTCTTGTCGCCATGGTGGAGGCGGGGGAAAAGGGCGGGGTGCTTGGGGATGTTTTAAAGAGGATTTCAAATTTTCTTGAAAAAGAGAGCAGTTTTCAGCAAAAGATCAAAAGCGCTTTACGCTATCCGATCCTGGTCCTTTCTGTTTTGGGGGTCGGCTTCATTATCGCGGTTACGCAAATCATTCCGAACTTTAAAGGTGTTTTTGCTTCTTTTGGATCCGACTTGCCCCTTCCAACCCAAATTCTTTTGCAAATCAATACTGTTTTCACCGTCTATTGGTGGCTAATCCTAATTTTTGCCTTTTTGTTGTATGCCGCCTTTAAAATGTTTTTGGGAAGTTACTTCGGCCGCCGTTTTTGGGATCGGATGATGCTAACTCTTCCGGTTATCGGAACGTTAAACACCAAGCTTTCTCTGGCCCGTTTTTTCAATATGCTCTCCGCGATGCTCGACAGCGGGATCACGATCGTTTATTCTCTTTCCGTTACCGCCGATACCGCCGACAACCGGATATTATCCGACGCGATCAACGATATCCAGAAAGAGATTATTGCCGGCGGCAGTTTGTCGCTGGCTATGAAAAAGCACCGGCTTTTTCCCGGAACCTCGGTACACATGGCGGCGATCGGCGAAAAATCCGGAAACCTTTCTGAAATGCTTTCCAAGACCGCCGCTTATTTTGACGAAGAGGCCGACTATGTCGTCTCCAATTTAATGACCCTGCTTGAGCCGTTTTTGATCTTCATTATGGCTCTGCTGGTTGCCCTGTTGGCTCTGGGTATTTTTATGCCGATGTGGGATTTAAACAGCGCGGTCATGGGGAACTAG
PROTEIN sequence
Length: 406
LNKYIYKARNEIGELVEGELNSVSAEAASLELTKKKLTPVTVEAKGLIFDFASLSYFFYRIKTRDLSIFFKQIGTIFSAGVPLFETLTAVEEQVTDNNLKKVIGRIKDDIESGSSFSQALSKHPRVFSHLLVAMVEAGEKGGVLGDVLKRISNFLEKESSFQQKIKSALRYPILVLSVLGVGFIIAVTQIIPNFKGVFASFGSDLPLPTQILLQINTVFTVYWWLILIFAFLLYAAFKMFLGSYFGRRFWDRMMLTLPVIGTLNTKLSLARFFNMLSAMLDSGITIVYSLSVTADTADNRILSDAINDIQKEIIAGGSLSLAMKKHRLFPGTSVHMAAIGEKSGNLSEMLSKTAAYFDEEADYVVSNLMTLLEPFLIFIMALLVALLALGIFMPMWDLNSAVMGN*