ggKbase home page

RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_14

Organism: Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_34_220

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(12480..16457)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2591
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 999.99
  • Bit_score: 1206
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=1743922 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1953
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3978
ATGCTTAATCCAATAAAAACAACTGATTTTGACGCTATAAAATTAAAATTAGCATCCCCTAAAAATATTTTAGAGTGGTCAAATGGCGAGGTTGTTAGGCCGGAAACTATTAATTATAGAACACAAAAACCGGAAAAAGACGGACTTTTTTGTGAAAAAATATTTGGTCCTTCTAAAGATTGGGAATGTTATTGCGGAAAATATAAAAAAATTCGCTATAAAGGTATTATTTGTGACAAATGCGGAGTGGAGGTAACCAGAAGTGCGGTAAGGCGTGAAAGAATGGGGCATATACAGCTTCAAACCCCCTGTACTCATATTTGGTTTCTTCGCGGTCTATCTTCAAAAATAGGTTTAATTCTCGGGCTTTCTATGCAAGCTCTTGAGAAGGTGGTTTATTTTGCTAATTTTATTATTACCGATGTTAATGAGGAATATAAAAATTCTACGGTAGAACAAATTAAATCTGAATTTAAACAAAAGAAAAAAATTATAGAAAATGAATTTATTAGACAAACTAAGGAAATAAAAAATAAAAAAGCAAAATTGTTGCAAAATGGCAAAAAAGAATCAGAAGCTCAAACTGAGATTTTAAAAGAAATTGATGTTTTGGAAAAACTTAAAGAAGAAAAGCTTGTAAATTTATCAGGGGCGCTAGATCAGGCACAAAAAGAATTAAAAGATTTGAAACCAATGGCTATTATTTCTGAAAGCGTTTATCAAAATTTAAGTTTGAAATATGGACACGTCTTTGAGGCTAGTATTGGTGCTGAAGCTCTGCGCGGACTTTTAGAGAGAATAGATTTAGGAAAAACGGCCAAGAAACTTGAAAAAGAATTAGAAGAGGTTATTGATACCAAGAAAGAAAAAATTATTCGCCGACTCAAATTAATAAAAAGTTTAAAACAAAACAATATTCGTCCGGAATGGATGGTATTGTCGGTTATTCCGGTTATTCCTCCGGATTTAAGGCCCATGGTAGCCCTTGATGGCGGAAGATTCGCAACATCTGATTTAAATGATCTGTACAGAAGGGTGATTAACAGAAACAATAGATTGAAACAATTAATTAAGCTAAATGCTCCGGAAGTAATTTGTAGAAATGAAAAAAGAATGTTGCAGGAAGCGGTAGATGCCTTGATTGATAATTCAGCCAGACACGGAAAAACAGTAATAGCTTCAACTGGACAAAAAAGAATGTTAAAATCTTTGGCGGATTCACTTAAGGGTAAACAGGGAAGATTTAGACAGAATTTACTTGGAAAAAGAATTGATTATTCTGGAAGAAGTGTGATTGTGGTTAATCCTAATTTGCGTTTAGATCAATGCGGTTTACCGAAGAAGATGGCTCTAGAATTATTCAAGCCTTTTATTATTAGTAAATTAATTAAAAAGGAGATTGTGCATAATGTTCGTAGCGCCTCTAAATTTATAGATACGGGGGTAGATGAAGTTTGGGATATACTAGAAGATATTATTAAGGGTTCATATGTTATGTTAAATCGCGCTCCCACCTTGCACAGGCTCGGAATCCAGTCTTTTAAACCGGTTCTAATTGAAGGAAAAGCTATTCAAATCCATCCAATGGTTTGTAGTGCTTTTAATGCTGATTTTGATGGAGATCAAATGGCGGTTCATGTTCCTTTGACTAAAGAAGCAATAAAAGAGTCTTCTGAGATTATGCTCTCTACTAAAAATTTATTAAAACCGGCAACAGGAGATCCGGTTGTTGCTCCGAGTCAGGATATTGTTTGGGGAGTTTTTTATATTACCACTGTTTTGAAAAAAGCAAAAGAGGAAAACATAAAATATTTTTCTAATACAGATGAAGCAAAGTTGGCATACTATACTAAAAATATCAAATTACATGAAATTATAAAAGTAAGAATAGAAAAAGAGGGCTTGATAGAAACAACTGTAGGAAGGGTTATTTTTAATGATATTTTACCTGAAAAGTTAAGATATATAAATGAAGTGGTGGGAAAGAAGAGGGTGGTTGGATTAGTAAAGGAATGTTTCCGGTATTATGGAGCAGAAAGGACCGTAGAACTACTAGATGAGTTAAAGGAAAAAAGTTTTAAGTTTATTACTCAGAGTGGTTTATCTTGGGGAATGGGCGATTTGCCAAAATTTGAAGAAAAAGATATTTTAATTTCAGAGACCCAGGAAATTGTGGATAATATACAAGAACAATTTGATGATGGTTTGTTAACTGAAAGTGAAAGATACGCCAAAGTAATTGAATCATGGACCTCTGCTAAGGAAAAAGTCACAGATATTTGTAAAACTGGATTATCTAGCGATGGACCGGTTTATTCAATGATTGAATCTGGGGCTCGCGGGTCATGGGCGCAACTTACTCAAATTTTAGGAATGAAAGGCTTAGTAACTTCGCCATCCGGAGATATTATTGAACTTCCCGTAAAAGGTAATTTTAAACGCGGATTTGGAGTTTTGGAATACTTTATCTCTACCCATGGTGTTCGCAAGGGACTTTCTGATACAGCACTAAGAACCGCTAATGCCGGTTATTTAACCAGAAGATTGGTGGATGTTTCTCAGGATGTAATTATTGCCGACGAGGATTGTGGTGATGAAGAAGGGTTTATTATGACTCAAAAAGAAAGCAAAGATATGGGTATTGATTTGACGCTAAGAATTTTAGGAAGATATTTAGCAAAAGATTTAAAGAATGAGGCGGGAAAAGTGTTGGTAAAAAAAGGAGAATTGATTACAGAGGATATTTTGGATAATATCAGTAAAGAAAAAATAACAGAAGCCTGTATTCGATCAGTTTTAAGTTGTAAGTTGGACAGAGGAGTTTGTGTGAAATGTTATGGATGGGATTTGGGTAAAAACAAACCGGCAAGTATTGGTGTGGCAGTGGGAACAATAGCAGCGCAATCAATCGGAGAACCGGGAACACAGCTTACTATGAGAACTTTTCACACTGGTGGTATTGCCGGTGTCGATGATATTACTCAGGGTCTTCCTAGGGTTGAAGAAATATTTGAAGCTAGATCACCAAAAAGAAAAGCATTTTTGGCGGATGTGAACGGAAGAGTAAAGATTGAATCAGGGGAAAGAATTATTGAAGATAAAAACGGAAGAACTATTATACAAAATTCACATTCCAAGTATTTAAAGATTTATTATGAAGGAACCACTACGGATAAATACAATTTTAACGAAATATTTAAAGAAATTAATTTAAAGCAAAAAGGAAATGATGAAAAAAAGAAAGTTAAAAAATCTGATTTTAAAATATTGGTGAAAGATGGAGAAATAGTAAAAGCAAATCAGGATATATTGTCCGTGGGTAAAAATAAAGTTCAAGCCGCAAGAGGCGGCACGGTGTCGGTGGATGCAAAAACAATAAAGATTAAAGTAAATACGGAAAAAATCAAAGAATTCATTGTTCCAAAGGGGGTGGCGATACTTGTAAATGAAGGAGATATGGTCCAAAAAGGAGACCAATTAACAGATGGTAGTTTGGATTTGAAGCAGTTATTTAGTTTAAAGGGGATATTGGGAACGCAAAAATATATCATCAAAGAAATTCAGAATGTGTATTCCTCTCAGGGTCAGCCCTTAAACGATAAACATATAGAAATTATCGCACATCAAATGTTTTCAAGATTTTTAGTTTTAGATGGCGGCGATACCGATTTATTGCCCGGAGAAATTATAGAAAATTCAGTTTTGCAAAGATCCAATAAAGCTCTGGAAAAAGGAAAAAAAGAAGCTAAAACCGAACAATTACTGCTTGGAATTACTAAAGCTTCTCTTACTACTGATAGTTTCTTGTCAGCAGCATCTTTTCAGGAAACAGCCAGAGTGTTAATTGAAGCTGCTATCAATGGAAAGATTGATTATCTGGAGGGTCTTAAGGAAAATGTGATTATCGGTAGATTGATACCGGCTGGTACCGGATATAAGGGAAAGCAGAAGAGAGATGATTATTCAGATAGAAAATAA
PROTEIN sequence
Length: 1326
MLNPIKTTDFDAIKLKLASPKNILEWSNGEVVRPETINYRTQKPEKDGLFCEKIFGPSKDWECYCGKYKKIRYKGIICDKCGVEVTRSAVRRERMGHIQLQTPCTHIWFLRGLSSKIGLILGLSMQALEKVVYFANFIITDVNEEYKNSTVEQIKSEFKQKKKIIENEFIRQTKEIKNKKAKLLQNGKKESEAQTEILKEIDVLEKLKEEKLVNLSGALDQAQKELKDLKPMAIISESVYQNLSLKYGHVFEASIGAEALRGLLERIDLGKTAKKLEKELEEVIDTKKEKIIRRLKLIKSLKQNNIRPEWMVLSVIPVIPPDLRPMVALDGGRFATSDLNDLYRRVINRNNRLKQLIKLNAPEVICRNEKRMLQEAVDALIDNSARHGKTVIASTGQKRMLKSLADSLKGKQGRFRQNLLGKRIDYSGRSVIVVNPNLRLDQCGLPKKMALELFKPFIISKLIKKEIVHNVRSASKFIDTGVDEVWDILEDIIKGSYVMLNRAPTLHRLGIQSFKPVLIEGKAIQIHPMVCSAFNADFDGDQMAVHVPLTKEAIKESSEIMLSTKNLLKPATGDPVVAPSQDIVWGVFYITTVLKKAKEENIKYFSNTDEAKLAYYTKNIKLHEIIKVRIEKEGLIETTVGRVIFNDILPEKLRYINEVVGKKRVVGLVKECFRYYGAERTVELLDELKEKSFKFITQSGLSWGMGDLPKFEEKDILISETQEIVDNIQEQFDDGLLTESERYAKVIESWTSAKEKVTDICKTGLSSDGPVYSMIESGARGSWAQLTQILGMKGLVTSPSGDIIELPVKGNFKRGFGVLEYFISTHGVRKGLSDTALRTANAGYLTRRLVDVSQDVIIADEDCGDEEGFIMTQKESKDMGIDLTLRILGRYLAKDLKNEAGKVLVKKGELITEDILDNISKEKITEACIRSVLSCKLDRGVCVKCYGWDLGKNKPASIGVAVGTIAAQSIGEPGTQLTMRTFHTGGIAGVDDITQGLPRVEEIFEARSPKRKAFLADVNGRVKIESGERIIEDKNGRTIIQNSHSKYLKIYYEGTTTDKYNFNEIFKEINLKQKGNDEKKKVKKSDFKILVKDGEIVKANQDILSVGKNKVQAARGGTVSVDAKTIKIKVNTEKIKEFIVPKGVAILVNEGDMVQKGDQLTDGSLDLKQLFSLKGILGTQKYIIKEIQNVYSSQGQPLNDKHIEIIAHQMFSRFLVLDGGDTDLLPGEIIENSVLQRSNKALEKGKKEAKTEQLLLGITKASLTTDSFLSAASFQETARVLIEAAINGKIDYLEGLKENVIIGRLIPAGTGYKGKQKRDDYSDRK*