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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_534_1

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: 2..673

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6Z8_DESAT similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 223.0
  • Bit_score: 370
  • Evalue 1.40e-99
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 440
  • Evalue 1.50e-120
RNA polymerase, sigma 70 subunit, RpoD subfamily similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 223.0
  • Bit_score: 370
  • Evalue 3.80e-100

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Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GCGAAAAAGTACGCCAATCGGGGCCTGCAGCTGCTCGACCTTATCCAGGAGGGCAACATCGGCCTGATGAAGGCCGTGGAAAAATTCGAATACCGGAGGGGCTACAAATTCAGCACCTATGCCACCTGGTGGATCAGACAGGCCATCACCCGGGCCATTGCCGATCAGGGCCGCACCATCCGTATCCCCGTGCACATGATCGACACCATCAACCGTCTCCTCAAGGGCACCAAGGATTTCTTGCGGGAAACCGGCCGCGAACCTACCCCCGAAGAGATGGCCGAACGGCTCGATATCGATCTGAGCAAGGTCAAAAATATCCTGAAGATCGCCAAGGAGCCCCTCTCTCTGGACACCCCCATCGGCAGCAACGAGGACAGCTATCTTTCCGACTTCATCGAAGACGCGGATACGCTGTCCCCGGAGGAGGCCACCGCCATGGAAAGCCTGCGGGAAAATCTCCGCAATGTCCTGCACACCCTCTCCCCCCGGGAGGAGCTGGTCCTGCGCATGCGTTTCGGCATCGACAACTCGGTTGACCTGACCCTGGAGGAGGTTGGCGACAACTTCGCCGTAACCAGGGAGCGGATCCGGCAGATTGAAGCCAAGGCGCTGAAAAAACTAAAGCACCCCACCCGGCGCAATCTTCTTTTTGCCTTTTATAATGATTAG
PROTEIN sequence
Length: 224
AKKYANRGLQLLDLIQEGNIGLMKAVEKFEYRRGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIDTINRLLKGTKDFLRETGREPTPEEMAERLDIDLSKVKNILKIAKEPLSLDTPIGSNEDSYLSDFIEDADTLSPEEATAMESLRENLRNVLHTLSPREELVLRMRFGIDNSVDLTLEEVGDNFAVTRERIRQIEAKALKKLKHPTRRNLLFAFYND*