ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_259_13

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(9936..11390)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 484.0
  • Bit_score: 921
  • Evalue 3.70e-265
tRNA modification GTPase MnmE n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0W2_DESAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 493.0
  • Bit_score: 478
  • Evalue 7.70e-132
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 493.0
  • Bit_score: 478
  • Evalue 2.20e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGCGTGATTTCCCGGATTTCAACGAGGCGACCATCGCCGCCATCGCGACGCCGCCCGGCACCGGCGGTATCGGGATCATCCGGGTAAGCGGCCCCCAGTCCCAGGCGATCCTTCAGCAGCTTTTTCAAGCGAAAACCCCCCCGCAAAATTTCATCAGCCACAGGCTTTATTTCGGCGCCATTGTCCATCCCCAAACCCGGCAGGTCATTGACGAGGTTCTCGCTGTTTATATGCGGGCGCCGCGGACCTACACCAGGGAAGATGTGGTGGAAATTCACGGTCACGGCAGTTATCTGCTTTTGCAGGAAATCCTGGCCCAGATCGTGACCTTCCCCTCTACCCGTCTGGCAGAGCCGGGGGAATTCACCAAACGGGCTTTTCTTAATGGTCGGATCGATTTGACTCAGGCGGAGGCGGTTGCCGAGCTGCTGGGCGCTAAAACCAAAGAGGGCGCCAGCCTGGCGGTTAGCCAGCTCCGCGGTGTATTGCAGGGAGAGATCTGGAAAATTCGTGATGCGCTGGTCGCGGTTCGTGCTATCATTGAGGTGGCCATCGATTTCCCCGATGAGGAGGTGGAGATCCTCGACAGCCAAGCGCTCAAGGCCCGGTTGGTGCGGGAGGTGCAGGAGCCCCTGGCCCGATTGCTGGCCAGGGCGGATGGAGGGAAAGTCATCAGGGAAGGGGTTTCCGTGGTCATTCTCGGCAGACCCAATGTCGGCAAATCCAGCCTGCTCAACTGTCTTCTCCGGGAAGACCGGGCCATCGTCACGGAGCTTCCCGGAACAACCAGGGACACCATTGAGGAGTGGTTGGACATCAAAGGGGTGCCGGTGCGCATTGTCGATACGGCGGGCATCCGGGAAACCGCCGAAGCGGTGGAAGAAATCGGCATCCGCCGGGCTCGGCAGAAGCTGGAAGAGGCGGATCTGGTTTTGCTGGTTCTTGACGGAGCGGAAGGGTTGCAGGCTGAAGACCGCACCCTGTTTGAGGTAGCTGCTGATAAAGCTGAGTTGAGCAGCTTGCCTGCGCAAACGAAACTTATACCCCCTGGGTGCAAGAAGGTAGTGGTGGTGGTCAACAAGGTCGACCGGGTGGCCACCTTGGATCTTGCGTTGTATACAGAGGCTTTTCGCGGGGTGCCGGTTGTTGCTATCTCCGCCACCACCGGCGAGGGCATTCGCAGCCTGGAGGAGGCGGTGTACGAGGCGGCCACCGGCGGGCAGGGTCTTCAAGAGCCTGGCGCAGCCGCGCCGAATGTGCGGCATGCCGCGGCTCTGCAGCGGGCCCTTGCAGCCGTGTACCAGATCGGCGAGGGACTGGCTGCGGACCTGCCGCCTGATCTCCTGGCCATTGATCTCCAGGCTGCCATGGCTTTTCTTGGAGACATCATTGGGGAAACCACTACGGACGATGTCCTGGATATGATTTTTGCGGAATTTTGTCTCGGAAAATAG
PROTEIN sequence
Length: 485
MRDFPDFNEATIAAIATPPGTGGIGIIRVSGPQSQAILQQLFQAKTPPQNFISHRLYFGAIVHPQTRQVIDEVLAVYMRAPRTYTREDVVEIHGHGSYLLLQEILAQIVTFPSTRLAEPGEFTKRAFLNGRIDLTQAEAVAELLGAKTKEGASLAVSQLRGVLQGEIWKIRDALVAVRAIIEVAIDFPDEEVEILDSQALKARLVREVQEPLARLLARADGGKVIREGVSVVILGRPNVGKSSLLNCLLREDRAIVTELPGTTRDTIEEWLDIKGVPVRIVDTAGIRETAEAVEEIGIRRARQKLEEADLVLLVLDGAEGLQAEDRTLFEVAADKAELSSLPAQTKLIPPGCKKVVVVVNKVDRVATLDLALYTEAFRGVPVVAISATTGEGIRSLEEAVYEAATGGQGLQEPGAAAPNVRHAAALQRALAAVYQIGEGLAADLPPDLLAIDLQAAMAFLGDIIGETTTDDVLDMIFAEFCLGK*