ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_577_4

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(5608..6153)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma70-like protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IP50_LEPFC similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 176.0
  • Bit_score: 275
  • Evalue 4.90e-71
putative sigma70-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 370
  • Evalue 1.60e-99
sigma70-like protein similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 176.0
  • Bit_score: 275
  • Evalue 1.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACTCCAACGGCTGACTTCTGGCAGGAACACAAAACGCGTTTGCGGAGCTATATCGCCAAACGGGTGCGGGAGCGCGATGCCGTGGACGACATCCTCCAGGAGATCTTCCTCAAAGCGCACACCAGCCTGCACACCCTCAAATCCCCCGGCAGCCTCACTGCCTGGCTGTACCGCCTTGCCGCCAATGCCATTATCGATCATTACCGAGCCCGGCCTTCGTGGCTTACGCTTCCCAAGGAATTGACGGCCCCTGAACCTGAACGCGACTATACCGCTGAGTTGGCGGCCTGTCTGCAGCCGCTTATCCATAACCTGCCCGAAATCTATCAAGCCGCCCTTGTCCTCTCGGAGCTTGAGGATTTGCCGCAGAAAGAGGTAGCCAAACGTCTGGGCCTTTCCCTTTCCGGCGCAAAATCCAGGGTGCAACGCGGCCGGGAGATGTTGCGCCGACGCTTGCTTGACTGCTGCGACATCGAAACCGGCAGGGGCGGCATTCTCGGCTACGAACCACGCAACAAAAACCGTGACGGCAGCTGCTGCTGA
PROTEIN sequence
Length: 182
MTPTADFWQEHKTRLRSYIAKRVRERDAVDDILQEIFLKAHTSLHTLKSPGSLTAWLYRLAANAIIDHYRARPSWLTLPKELTAPEPERDYTAELAACLQPLIHNLPEIYQAALVLSELEDLPQKEVAKRLGLSLSGAKSRVQRGREMLRRRLLDCCDIETGRGGILGYEPRNKNRDGSCC*