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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_430_19

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(24704..25738)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3C2_DESAT similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 341.0
  • Bit_score: 510
  • Evalue 1.00e-141
RNA polymerase, sigma 32 subunit, RpoH; K03089 RNA polymerase sigma-32 factor Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 344.0
  • Bit_score: 680
  • Evalue 1.30e-192
RNA polymerase, sigma 32 subunit, RpoH similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 341.0
  • Bit_score: 510
  • Evalue 2.80e-142

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Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGTCCCTGTCCCTCCCTGGAAAGAGATTGACCTTTGGCGCTGTTCTAATAATAATGGCCTCCATGAAAGAAGATCCGGAACTCCTTGTAATAGCCGATGATGATGAGCAGGGAATGCTGCATCCCCTCGTCGCCCTGTCGGATGATGACCATCTCCCGGCCTTGGGCAATGCTGGGCTGCATCGCTATCTGCAGGAAATCAGCCAGTACAAGCTTATGAGCCGCGAAGAGACCGATGAGCTGGCCCGGCATTTCCAGGAAACCGGCGATCCGGAGGCGGCTTACCAACTGGTGACCGCCAATCTGCGGCTGGTGGTCAAGGTGGCCATGGATTTCCAGAAATACTGGATGCAGAACTTTCTTGATCTCATTCAGGAAGGCAATGTCGGCCTGGTGCAGGCGGTGAAGAAATTCGACCCCTACCGGCAGGTGAAGTTTTCCTACTATGCTGCCTACTGGATCAGGGCTTATATCCTTAAGTTCATTATGGATAACTGGCGGCTGGTAAAGATCGGCACCACCCAGGCCCAGCGCAAACTTTTTTTCAGCTTGAATAAAGAGAAAAAACTGCTAGAATCGCAAGGCTTTGCCCCCGAGGTCAAGTTGCTGGCCCAACGCCTCAATGTCAAGGAAAGTGAAATCATTGAGATGAGCCAGCGCATGGACAACTGGGATGTTTCCCTGGAAAGTCCGGTGCGGGAAGGTTCCGATGAGGAACAGAAGAATTTTCTGCCCATGCTGGGGCCTACCGTGGAAGAACGGGTGGCGGAAAAGGAAGTACAGGAATGGATGGCAGAGGCTCTGGATAAACTGCGCGAGACCCTGAACGAGAAGGAAAATGCCATCCTGACCAACCGGTTGCTGAGCGACGAGCCTCTAACCCTGCAGGATATTGCTGACAAGTTTGACATTTCCCGGGAACGGGTCCGGCAGATAGAAGTCAATCTCCTGAAAAAGATGCGGGTATATTTTGAAAAGGAAGTTCCAGATATCAAGGATTTCCTTGCTGAATTCCTCAACCCCTGGCGCTCCTGA
PROTEIN sequence
Length: 345
MSLSLPGKRLTFGAVLIIMASMKEDPELLVIADDDEQGMLHPLVALSDDDHLPALGNAGLHRYLQEISQYKLMSREETDELARHFQETGDPEAAYQLVTANLRLVVKVAMDFQKYWMQNFLDLIQEGNVGLVQAVKKFDPYRQVKFSYYAAYWIRAYILKFIMDNWRLVKIGTTQAQRKLFFSLNKEKKLLESQGFAPEVKLLAQRLNVKESEIIEMSQRMDNWDVSLESPVREGSDEEQKNFLPMLGPTVEERVAEKEVQEWMAEALDKLRETLNEKENAILTNRLLSDEPLTLQDIADKFDISRERVRQIEVNLLKKMRVYFEKEVPDIKDFLAEFLNPWRS*