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scnpilot_p_inoc_scaffold_4133_2

Organism: SCNpilot_P_inoc_Chimera

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 625..1587

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIX2_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 7.60e-144
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 2.10e-144
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU52837.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 1.10e-143

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGATTGATGCGCCGCAACAAGGCGTCCAATACTGTTTTCTTGAAAAGGCATATGCCCAGCGTATGGCTACACCGGACCTTCGAACCCTTCGCTATTTCGTGGCCGTCGCCGAGGAGCGCAGCGTCGGCAGGGCTGCCCGCCGGCTCAACATGGCGCAGCCGCCGCTCTCGGTGCACATCAAGAACCTGGAGGCGGCCGTGGGCACGCCCCTGTTTCGCAGGGCGGCGCACGGCATGGAGATCACCGATGCGGGCAATGCACTGTTCCGGCGCGCGAAAGAGGCACTTCTGCTGGCCAACGAGGGCTTCGACGCCGCGCGCGCCATCGGATCGGGCAACCGGGGCCGGCTCACCATCGGCACGATGGTCGTGCTGTCTTATCTCGTGTTGCCGAGGCTCGAGAACGAGCTGCGGCGCAGGCTGCCGGAGGTGGAGATCCAGTATGTGGAGCTGAATGCCGTCAACAATGTCTCGGCCCTCACCGACTCGGACGTGTCAGTGGCGATCTGCATTCCGCCCATTGCGCAGGCGGGCATTGCGACGCAGCGCATCGGCAGCCAGCCGCTGATGCTTGCGGTGCGCGTCGACTCTCCGCTGGCGCGGCTGACCAGCGTTCCGCTGGCGCGCCTCTCGGGCCTGGCGCTCATCGGACTGCCGGTTCCCGAGGGCGATGTCGACAAATCGGTCGTTGCGTCGCTGCTGCGGCGGCACGATGTCAGCATGCCGATTGCCCAGCGGGTCGAGACGATGGTCTCGGCACTGGCGCTGGTTCTGGCAGGCAAGGGCGTCGCGATCCTGCCTGCCTGCGCTCAGATCGGCCGCCCCCCTGGCGTGGTGTTCAGGCCCTTGCGAAACGTCGACGCCGCAATGGAGATTGCGGCCTGCTGGCGCAACGATTGGGAAAGTCCGTTGATCGCCCCGTTCCTGGCTTGTGCGCGCACAGCCCTGCAAGAGCCGACGTAG
PROTEIN sequence
Length: 321
MIDAPQQGVQYCFLEKAYAQRMATPDLRTLRYFVAVAEERSVGRAARRLNMAQPPLSVHIKNLEAAVGTPLFRRAAHGMEITDAGNALFRRAKEALLLANEGFDAARAIGSGNRGRLTIGTMVVLSYLVLPRLENELRRRLPEVEIQYVELNAVNNVSALTDSDVSVAICIPPIAQAGIATQRIGSQPLMLAVRVDSPLARLTSVPLARLSGLALIGLPVPEGDVDKSVVASLLRRHDVSMPIAQRVETMVSALALVLAGKGVAILPACAQIGRPPGVVFRPLRNVDAAMEIAACWRNDWESPLIAPFLACARTALQEPT*