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cn_combo_scaffold_4796_8

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7146..7412)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F314_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 66.0
  • Bit_score: 91
  • Evalue 6.40e-16
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 92
  • Evalue 8.00e-17
Pilus assembly protein CpaC {ECO:0000313|EMBL:AJR23694.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 96.0
  • Bit_score: 92
  • Evalue 2.30e-16

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGATTGCAGGTCTGAGCTTTTCCAATTCGAATGTTACCGACAGCCGCGTGCCATTCTTGGGCGATATCCCGATCATCGGCGCGCTGTTCCGCCGTCAGCGCGAGGCCAATGAACAGCAGGAATTGATCATCGTGGTGACGCCGCGCGTGGTGAATGCGCTCAATCCCGATGAAATCCCGCCCTTGCCCGGCACAGCGCCGGCGGCCCTGCCCAAGTCACCGGCCCGGCCACAAAAGGCCAACAGCTTTGGCGTGGTGCGAAACTGA
PROTEIN sequence
Length: 89
VIAGLSFSNSNVTDSRVPFLGDIPIIGALFRRQREANEQQELIIVVTPRVVNALNPDEIPPLPGTAPAALPKSPARPQKANSFGVVRN*