ggKbase home page

cn_combo_scaffold_4796_9

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7409..8320)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein secretin CpaC n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039B0521 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 291.0
  • Bit_score: 304
  • Evalue 9.60e-80
Pilus assembly protein CpaC {ECO:0000313|EMBL:AJR23694.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 281.0
  • Bit_score: 307
  • Evalue 2.70e-80
cpaC; Flp pilus assembly protein secretin CpaC similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 281.0
  • Bit_score: 304
  • Evalue 3.50e-80
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAACATCGCACGGTTTCTTGCGCACCTCTCGCTCAGCAGCGCGCTTGCCGCACTCCCGGCCGCCATTGCGGCACAGGAATATGTCGCACCCGGCAGCAACCAGGCATTGGAATTCGATAAGCCGATTGGCCGCATCGACCTTGATCGTGATGGTGTGGTGTCGGTTAGCCTGACTTCCGCACGCGCGATCAAGGTTGCCGGAGTTGCTCCAGGCGAAGCGGAATTGCAGATTTTCGCCCGCGATGGCAGCTTGCTCAAGGCCACCACGTTCCGGGTGCCGGACCCTGCGCTGGATGCAGGGGCGGCTCCCAATCTGTCACCCAGCGCGCAGGATGTGGTGGCGGTCGATGTGCAATTTGCCGCTGTCTCCACTTCCACCCTTAAGGCGTTGGGTTTCAACTTCTCCCGGCTGACTGGCGATATCCAGGGCGCGGTCATCTCCCCCAACTCGCTCAACTCAGCCGCGTTCAATCCGGAAGGTCTGAGCATTTCGGCATCGGCGCCGATCCAAGAGGCGTTCAACCTGTTTCTGGCAGCCCCCAATCGCGGGATTGGGGCGGCGCTGAGCGCCTTGTCCAGCACCGGCCTATCGCAGCTGCTCGCTCAGCCAACGCTGCTGGCCCGTTCGGGCGAGCAGGCCAGCTTTCTGGCAGGCGGCGAAGTGCCGATCCCGGTTCCCGGTGTCGCTGCAGCCGGTGTCGGCAATGCAGTTACCATTGAATATAAACAATTCGGGGTGCGGCTGGCTGTCACGCCCTTTGTGATGAAAAATGATCGCATTGTGCTCAAGGTCGCCCCCGAAGTGAGCGAGCTTGATTTCGGCATTGGCGTGCAGGGTTTGTCGTCCCCGGCCTGCGGCGGCGTTCGGCTGAGACGACGGTTGAACTCAACGCCGGGCAAAGCTTCGTGA
PROTEIN sequence
Length: 304
MNIARFLAHLSLSSALAALPAAIAAQEYVAPGSNQALEFDKPIGRIDLDRDGVVSVSLTSARAIKVAGVAPGEAELQIFARDGSLLKATTFRVPDPALDAGAAPNLSPSAQDVVAVDVQFAAVSTSTLKALGFNFSRLTGDIQGAVISPNSLNSAAFNPEGLSISASAPIQEAFNLFLAAPNRGIGAALSALSSTGLSQLLAQPTLLARSGEQASFLAGGEVPIPVPGVAAAGVGNAVTIEYKQFGVRLAVTPFVMKNDRIVLKVAPEVSELDFGIGVQGLSSPACGGVRLRRRLNSTPGKAS*