ggKbase home page

scnpilot_expt_750_bf_scaffold_827_18

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(14046..14579)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=2 Tax=Acidovorax RepID=K0I141_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 352
  • Evalue 2.30e-94
  • rbh
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 352
  • Evalue 6.60e-95
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EHL23495.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 352
  • Evalue 3.30e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCTGTTCCAGTCTGCCGAGTCCCGCTATAACCAATGGGTGCGTGAGCACTACCGTTTTTTGCTGCGCAGTGCGTGGGCGCTCACTGGTTCGCGCGCCATTGCCGAAGACGTGGTGCAAGACTGTTTTGCCAACGCCTGGAAGCACCGGGAGCAACTGCGCGACGCTGCGCTGGCACGGGCTTGGCTCTTTCAGATCATGCGCCGCGCCGCCTTTCGCCAGGCCGCACCCAGCATGCAGTCGCTGGACGATGAAGAGCAGCCCGAGCAAGCGGCGCCCGACGCGGGGCTGGACGACAAACTCGATGTCGTCAAGGCGCTCGCGCGCCTGGCGCCCATCCACCGCGAGGTGCTGGTGCTGTTTTATTTCGACGACATGCCCACCGCCCAGATGGCCGAGGCGCTGGAGATCGCGCCCGGCACGGTGTTGTCGCGCCTAGCCCGTGCGCGCGACGCTTTGAAGCTGGCCATGGGGGTACCTGCGACACCCAAGGCCGATGTCAACGTTACCCCGTTTCGCAGGACCAAGACATGA
PROTEIN sequence
Length: 178
MLFQSAESRYNQWVREHYRFLLRSAWALTGSRAIAEDVVQDCFANAWKHREQLRDAALARAWLFQIMRRAAFRQAAPSMQSLDDEEQPEQAAPDAGLDDKLDVVKALARLAPIHREVLVLFYFDDMPTAQMAEALEIAPGTVLSRLARARDALKLAMGVPATPKADVNVTPFRRTKT*