ggKbase home page

scnpilot_expt_750_bf_scaffold_1907_5

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(5478..7049)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AC290 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 457.0
  • Bit_score: 833
  • Evalue 1.00e-238
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 520.0
  • Bit_score: 455
  • Evalue 1.60e-125
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:AAU92830.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 520.0
  • Bit_score: 455
  • Evalue 8.10e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylococcus capsulatus → Methylococcus → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
ATGTCAAACCTGACCCCCGAGGAGTTTCTCCATACCTTCATTGATGAAGCCCGGGACATAGCTCCCTTTTCCAGTTGCACCAGCCTGCAGTCTTTTATTCATCAGATTGTGTTCAAGGCAAGTGCTTGTCTGGAGGAACGCTACCGGGCGATAGAAGATTTGCGCGGCGCACTGGCGCCCGAGCAATATGCACAGTTGATCGTGAACATCAAGAACAGCATTGGCGGCGAATTTGCGGTAGTTTCCAGCGACAAGCGAAGGGTGCATATCCATGCCCATCGATGTCCATTCGGCGAGTTGGTGCATTCAGCCCCGGGGCTGTGCCATATGACCTCCAGCATCTTCGGCGGCATCGCGGCGCGTAATTTCGGCTACGCGAAAGTCGAACTGAAGCGCCGCATCGCGCTTGGTAGCGACCACTGCGATATCTGTATCCACCTGGACACATCGGCCGCGTCCGAGGTACTCGGTGACGAGTATTTCAGCGATGGCTATCAGGTGATCGCCGAGGTACGCGCACCGGATGAGCTGCAAAAGGTTATCGAGGAGCGTTTGCATACGCTATGGAGTCAGGATCCCACGCGACAGACGAACGCGGATGTTTCGACGCGCCCTTGCCTGATCGCCACCAGCAGGCAAATGCAAGACCTGCTGCGCGCGGTGGAGCGGATCGCCGACACCCGTGCGACCGTGCTGCTCAATGGCGAGACCGGGGTCGGCAAGGAAATACTGGCCAGATCCATCCATGGCATGTCTTCGCGCCTGAACCAGTCCTTCGTCGCGGTGAATTGCGGTAGCCTCCCGGCAGATCTGGTCGAGAGCGAACTGTTCGGCCATGAGCGCGGCGCCTTCACCGATGCCAAACAACAGCGGCAGGGCCGGTTCGAACTCGCTGACCAAGGCACCTTGTTTCTGGACGAAGTCGACAGCTTGTCGCCGAAGGCCCAGGTGTCATTGCTACGGGTGTTGCAGGAGGGACGCTTCGAGCGGGTCGGCGGGCACCAGCCAATAGCCTGCGATGTGCGGGTCATCGCTGCCAGCAATCGCAATCTCGCCGAACTGGTTGAGCGCGGCGAGTTCCGCAAGGACCTGTTCTTCCGCCTGAATGTCGTGCCATTGCACATACCACCGCTTCGTGAGCGGCGCGAGGACATAGCGCCTCTCGTCAAAATGCTACTGCGGCGGTTCGCGGACCGCTACCAGACTGCGGTCAAAGAGCTGTCTCCGGCCGCGATGCGCTGTCTGGAGGAACACGCGTGGCCTGGCAATGTCCGCGAACTGGAAAATGTCCTCGAACGCTCTTTCCTGTTTTCCGAGGGGCCAGTGATTCAACGTATCAGCTTCGATTTGGCGCCACGCCTTGGGCATGTGCCATTGAACGAGACGGCCGACCTGCGACAACTGAAAAAGAATGCCGCCGACGAGGTCGAGCGGCGGGTCCTGGAATCTTTGCAGGAACAGACCAGTGGTGATGTCAGGGCAATGGCCGCGGCGTTAAACCTCACGCAGCGTGCGATCTATCAGAAGCTCAGCCATCACGGTCTCGGTACGACGCGCGAGGCAAAGAGCTGA
PROTEIN sequence
Length: 524
MSNLTPEEFLHTFIDEARDIAPFSSCTSLQSFIHQIVFKASACLEERYRAIEDLRGALAPEQYAQLIVNIKNSIGGEFAVVSSDKRRVHIHAHRCPFGELVHSAPGLCHMTSSIFGGIAARNFGYAKVELKRRIALGSDHCDICIHLDTSAASEVLGDEYFSDGYQVIAEVRAPDELQKVIEERLHTLWSQDPTRQTNADVSTRPCLIATSRQMQDLLRAVERIADTRATVLLNGETGVGKEILARSIHGMSSRLNQSFVAVNCGSLPADLVESELFGHERGAFTDAKQQRQGRFELADQGTLFLDEVDSLSPKAQVSLLRVLQEGRFERVGGHQPIACDVRVIAASNRNLAELVERGEFRKDLFFRLNVVPLHIPPLRERREDIAPLVKMLLRRFADRYQTAVKELSPAAMRCLEEHAWPGNVRELENVLERSFLFSEGPVIQRISFDLAPRLGHVPLNETADLRQLKKNAADEVERRVLESLQEQTSGDVRAMAAALNLTQRAIYQKLSHHGLGTTREAKS*