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scnpilot_expt_750_bf_scaffold_4323_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 3..287

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Afipia birgiae RepID=UPI000371F167 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 185
  • Evalue 3.50e-44
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKS39977.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 94.0
  • Bit_score: 180
  • Evalue 9.10e-43
TolC family type I secretion membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 94.0
  • Bit_score: 170
  • Evalue 1.90e-40

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
GTGACGGCGTCGGAAATCGCACTGAACGGCGTTCGCGAAGAGGCGAGGGTCGGGCAGCGCACCACGCTCGACGTCCTGAACGCACAGCAGGCGCTGGTGAACGCGCGCGTCGCGCTCGTGACCGCGCAGCATGACCGCGTGGTGGCCTCGTACAGCGTGCTCAACTCGATCGGCCGCCTGTCGCCGAGCGTGCTGAACCTCGCGACCAACGTTTACGATCCGAGCGTCCACTATCATCAGGTCCGCGACAGCTGGTTCGGCGTCCGGACGCCTGACGGCCGCTGA
PROTEIN sequence
Length: 95
VTASEIALNGVREEARVGQRTTLDVLNAQQALVNARVALVTAQHDRVVASYSVLNSIGRLSPSVLNLATNVYDPSVHYHQVRDSWFGVRTPDGR*